Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03805 ATGAGGTGGGAAAAGGTTCAGGTGAACCCCATAGCCATAGAAGGAGGGGGAAGTGAGGTTTCTGGGCCAGGAAAAAGGTGGGGCCACACCTGTAACGCCATCAAAGGTGGAAGACTTGTTTATGTTTTCGGTGGTTATGGCAAAGATAACTGTCAGACCAACCAAGTTCATGTTTTTGACACTGTGAAGCAGACTTGGAGCCAACCTGCAATAAAAGGCTCCCCACCTACTCCTAGGGACAGCCATACTTGCACAGCCATTGGTGATAATCTATTTGTGTTTGGGGGTACAGATGGGATGAATCCACTGAAGGATTTGCACATATTAGACACTTCTTCTCATACATGGATTTCTCCGACTATAAGAGGAGAAGGGCCAGAGGCACGTGAGGGTCATAGTGCTGCAGTTGTTGGCAAACGGCTATTCATCTTTGGTGGTTGTGGAAAATCTGCAGATAATAATAATGAGGTCTACTACAATGATATTTACATATTGAATACAGAGACGTTTGTTTGGAAGTGTGCTACAACATCAGGCACTCCACCATCTCCTCGTGATAGCCACACTTGCTCATCTTGGAAAAACAAAATTATTGTGATCGGGGGCGAAGATGGGCATGATTATTATTTGTCTGATGTCCATATCCTTGATACTGATACTCTAATTTGGAGGGAGCTGAGTACGTCAGGCCAATTGTTGCCACCTCGAGCTGGTCATTCCACAGTTTCTTTTGGCAAGAACTTGTTTGTTTTTGGAGGATTTACAGACGCCCAAAATCTGTACAATGACCTTTATATGCTTGATATTGATACTGGTATTTGGACAAATGTTACAACTGCAACCAATGGTCCTTCTGCTAGATTTTCTGTAGCTGGTGACTGTTTAGACCCATTTAAGAGTGGTGTTCTTGTGTTCATCGGTGGTTGTAACAAAAGTCTTGAGGCCTTGGATGACATGTATTACCTATATACAGGGATGGCTAGGGAAAGTGAACAGAGACCAGAGAAGTTATCATTAAGAAAGCAATTGAAGCTGAAATGCCAAGAACAAAATCTCAATCCAGGCCAAAATCAAGTCATGGTTAGATATGGAGTTGGTGCTGATATCAACCAGATCATGACAATGTTGAATTATAGCCAGCCAAGTAGACTAAATATCCCAGTAAATCAATCCCCGCCTCCTTCTGGAAAGAAAATGTTTGAAGCCAGGGTTACTGAAAACATCTCAGAAGGATATACTATTGAAACTGTTATTGATGGAAAGCCTCTTCGTGGAATTCTGTTTTTAAACAAGCCAAACACTCTGCACCCGGCTGGTCATGCTTTCAGTAGGAAAAGGACTGCTGGGGAAATTGATGGTGTTATCTCAAATGGTATACACCCTAACAAATCAAAGACTCCTAAAGTGCTTAAGCAAAATCAAATGGAAAATAGACAAGCGGTTTGTGGGGACGGTTCAGAATCTCATGAACACCATTCTGAAGCTGTTGCTGCACTTACATTGAGTAACCCAACAACTGCCAATGTGCCTGATACCCATAAGGTTTCTGCCAACCCAGAACCAGAAGCTGCTTCATTGAATCGAAATGATGGAAAAAATGGAACACCAATCTTAGGGGAAAACTTTAAAAATGATGGAGGAAATGATGTGACAAGTTCCAGAGGTGAAGCCCAGACAAATGATTTGACAAATGTTCCAATTTCCAACTTAGAAGCTCCAAGACATGATCAAAAAAGTGATGCACCAAACTGCAACATGGAATTGTGGAAACCTGCCACAGCTGAGAGTGCTGTGTGTTTGTCAAATCAAGGTGCAGTGGCGGATTCCACAACTCCACAAGGACAGGAGAATGCAGTGAGCCAGCAAAATTAA 1872 0.4247 MRWEKVQVNPIAIEGGGSEVSGPGKRWGHTCNAIKGGRLVYVFGGYGKDNCQTNQVHVFDTVKQTWSQPAIKGSPPTPRDSHTCTAIGDNLFVFGGTDGMNPLKDLHILDTSSHTWISPTIRGEGPEAREGHSAAVVGKRLFIFGGCGKSADNNNEVYYNDIYILNTETFVWKCATTSGTPPSPRDSHTCSSWKNKIIVIGGEDGHDYYLSDVHILDTDTLIWRELSTSGQLLPPRAGHSTVSFGKNLFVFGGFTDAQNLYNDLYMLDIDTGIWTNVTTATNGPSARFSVAGDCLDPFKSGVLVFIGGCNKSLEALDDMYYLYTGMARESEQRPEKLSLRKQLKLKCQEQNLNPGQNQVMVRYGVGADINQIMTMLNYSQPSRLNIPVNQSPPPSGKKMFEARVTENISEGYTIETVIDGKPLRGILFLNKPNTLHPAGHAFSRKRTAGEIDGVISNGIHPNKSKTPKVLKQNQMENRQAVCGDGSESHEHHSEAVAALTLSNPTTANVPDTHKVSANPEPEAASLNRNDGKNGTPILGENFKNDGGNDVTSSRGEAQTNDLTNVPISNLEAPRHDQKSDAPNCNMELWKPATAESAVCLSNQGAVADSTTPQGQENAVSQQN* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03805 623 Gene3D - 152 400 IPR015915 GO:0005515
Rops2g03805 623 Gene3D - 1 151 IPR015915 GO:0005515
Rops2g03805 623 MobiDBLite consensus disorder prediction 504 588 - -
Rops2g03805 623 MobiDBLite consensus disorder prediction 545 567 - -
Rops2g03805 623 Pfam Galactose oxidase, central domain 184 229 - -
Rops2g03805 623 Pfam Galactose oxidase, central domain 235 284 - -
Rops2g03805 623 SUPERFAMILY Galactose oxidase, central domain 20 227 IPR011043 -
Rops2g03805 623 SUPERFAMILY Galactose oxidase, central domain 180 316 IPR011043 -
Rops2g03805 623 SMART kelc_smart 39 89 IPR006652 GO:0005515
Rops2g03805 623 SMART kelc_smart 247 293 IPR006652 GO:0005515
Rops2g03805 623 SMART kelc_smart 196 246 IPR006652 GO:0005515
Rops2g03805 623 SMART kelc_smart 90 139 IPR006652 GO:0005515
Rops2g03805 623 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 5 157 564 - -
Rops2g03805 623 Pfam Galactose oxidase, central domain 38 87 - -
Rops2g03805 623 Pfam Kelch motif 126 170 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03805 53 312 Acyl Lipid Metabolism Gene Families AT3G05420 28.413 1.95e-27 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03805 - - gmx:100803752 1056.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03805 2 70280481 70288053 Rops2g03805 2 70280481 70288053 ECH