Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03734 ATGGGTGAAGACTTCGACAATCTCAGTAATAAACTCCCCGAACTCAAATTAGATTCTAAACAAGCACAAGGGTTTCTATCATTTTTCAAAACCCTACCTAATGACCCAAGGGCTATTCGGTTTTTTGATCGTCGGGACTATTATACTGCTCATGGTGAGAATGCGACTTTCATTGCCAAGACCTACTACCACACTACTACTGCTTTGCGACAACTGGGTAGTGGATCAGATGCTCTTTCCAGCGTAAGTGTCAGCAGGAACATGTTTGAAACAATTGCCCGTGATCTACTTTTGGAGAGAACAGACCAGACTCTCGAGGTCTATGAGGGTAGTGGTTCTAATTGGAGACTGGTCAAAAGTGGAACACCTGGTAATATTGGCAGTTTTGAAGATGTTCTGTTTGCCAACAGTGAAATGCAAGATTCTCCGGTTGTTGTTGCACTGTCACTTAACTTCCGTGAAAATGGGTGCACCATTGGGTTAGGATTTGTTGATCTAACTAAGAGAGTACTTGGGATGGCTGAATTCCTTGATGACAGTCACTTCACGAATGTGGAGTCAGCTTTGGTTGCTCTTGGCTGCAAAGAGTGCCTTGTTCCTATTGAGTCTGAAAAATCTATTGAAAATAGAATGTTGTGCGATGTGTTAACTAAATGTGGTGTGATGTTAACCAAGAGAAAGAAATCTGAATTTAAAACCAGAGACCTGGTACAGGATCTTGGCAGGCTTGTTAAAGGTTCTATTGAACCAGTTCGAGATTTAGTGTCTGGATTTCAATTTGCACCTGGTGCTTTGTTTGCATTACTATCTTATGCAGAGTTACTTACAGATGAAAGCAATTATGAAAATTATACTCTTCGTAGGTACAATCTTGACAGTTACATGAGGTTAGATTCTGCAGCCATGAGGGCGCTTAATGTCCTGGAAAGCAAGACTGATGCCAACAAAAATTTCAGTTTGTTTGGTCTCATGAATAGAACCTGTACAGCTGGAATGGGAAAACGATTATTGCATATCTGGCTAAAACAGCCATTATTAGATGTTGAAGAAATTAATTCCAGGCTGGATGTAGTGCAAGCATTTGTAGAGGACACTGTGCTTCGGCAAGATCTAAGGCAGCATCTGAAAAGAATATCAGACATTGAGCGATTGGTGCACAATCTTCAGAAACGAAGAGCTGGTCTGCAGCATGTTGTTAAACTTTATCAGTCAAGTATAAGACTACCTTACATTAAAAGTGCTCTGGAAAGGTATGATGGACAATTTTCCTCAATGATGAAGAGCAGATATTTGGAACCTCTTCAGTATTGGACTGATGACCTAAACAATTTTATCAAGCTTGTAGAAACCTGTGTTGACCTTGATGAACTGGGGAACCAGGAGTACGTGATTTCTTCTAGTTATGACCCTGCACTAACTAAATTAAAGGAGCAGCAAGAATTATTAGAAAGCCAAATACATAACTTGCATAGACAAACTGCTGATGATCTTGATCTGCCTATAGATAAGGCATTAAAGTTAGACAAGGGCACACAGTTTGGACATGTTTTCAGAATCACAAAGAAGGAAGAGCCGAAAATAAGGAAGAAGCTCAGCACCCAGTTTATTGTGCTGGAAACCCGTAAAGATGGAGTAAAGTTTACCAACACGAAGCTCAAAAAATTGGGGGACCGGTATCAACAAATTCTTGAGGAGTACAAGAGTTGTCAAAAAGAGATTGTTGATAGAGTAGTTCAAACTGTAGCATCTTTCTCTGAGGTGTTTGAATCTTTGGCTGAATTAATTTCTAAATTGGATGTGTTACTAAGCTTTGCCGATTTGGCTTCTAGTTCTCCTGCTCCCTACACAAGACCTGACATCACTTCATCGGACAAAGGAGATATTATTTTAGAAGGCTGCAGACACCCTTGTGTGGAGGCACAAGGCTGGGTGAATTTTATACCAAATGATTGTAAGCTTATCAGAGGAAAAAGTTGGTTTCAAATAATAACAGGGCCTAACATGGGTGGGAAATCAACATTCATCCGTCAGGTGGGCGTGAATATTTTGATGGCACAAGTTGGTTCCTTTGTTCCTTGTGACAAAGCCAGCATATCTGTTCGTGATTGCATTTTTGCTCGTGTTGGTGCAGGTGACTGCCAACTTCGTGGAGTTTCTACCTTTATGCAAGAAATGCTTGAAACTGCATCAATATTAAAAGGAGCTACTGACGAGTCCTTGATAATCATTGATGAGTTGGGACGTGGGACATCAACTTATGATGGATTTGGTCTAGCTTGGGCCATTTGTGAGCACATTGTTGAAGTGATCAAAGCACCTACTTTGTTTGCAACCCACTTTCATGAACTGACCGCATTAGCCCTTGAAAATGCAAGTGATGATCCAAATAAGCAAATTGTCGGTGTGGCAAATTATCATGTCAGTGCACATATTGATGCATCAACTCGCAAGCTAACTATGCAATACAAGGTTGAACCAGGAGCTTGTGATCAGAGTTTTGGTATTCATGTTGCTGAGTTTGCAAATTTCCCTGAAAGTGTTGTTTCCCTAGCTAGAGAAAAGGCAGCAGAATTGGAAGATTTTTCTCCCTCTGCAACATCCTTAATTGGTACTACAGAGGAGGTGGGTTCTAAACGTAAGAGAGTATTTGAACCCAATGACGTGTCTCGAGGGGCTGCAAGGGCTCGCCACATTCTTGAAGCATTTGTTGCTTTGCCTCTAGAAACCATGGATAAAAGGCAAGCTTTGCAAGAAGTTAGGAAATTAAAAGATACTTTGGAGAAGGATGCAGAAAATTGTCATTGGCTGCAAAAATTCTTGTAG 2823 0.4074 MGEDFDNLSNKLPELKLDSKQAQGFLSFFKTLPNDPRAIRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGSGSDALSSVSVSRNMFETIARDLLLERTDQTLEVYEGSGSNWRLVKSGTPGNIGSFEDVLFANSEMQDSPVVVALSLNFRENGCTIGLGFVDLTKRVLGMAEFLDDSHFTNVESALVALGCKECLVPIESEKSIENRMLCDVLTKCGVMLTKRKKSEFKTRDLVQDLGRLVKGSIEPVRDLVSGFQFAPGALFALLSYAELLTDESNYENYTLRRYNLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHIWLKQPLLDVEEINSRLDVVQAFVEDTVLRQDLRQHLKRISDIERLVHNLQKRRAGLQHVVKLYQSSIRLPYIKSALERYDGQFSSMMKSRYLEPLQYWTDDLNNFIKLVETCVDLDELGNQEYVISSSYDPALTKLKEQQELLESQIHNLHRQTADDLDLPIDKALKLDKGTQFGHVFRITKKEEPKIRKKLSTQFIVLETRKDGVKFTNTKLKKLGDRYQQILEEYKSCQKEIVDRVVQTVASFSEVFESLAELISKLDVLLSFADLASSSPAPYTRPDITSSDKGDIILEGCRHPCVEAQGWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDKASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDESLIIIDELGRGTSTYDGFGLAWAICEHIVEVIKAPTLFATHFHELTALALENASDDPNKQIVGVANYHVSAHIDASTRKLTMQYKVEPGACDQSFGIHVAEFANFPESVVSLAREKAAELEDFSPSATSLIGTTEEVGSKRKRVFEPNDVSRGAARARHILEAFVALPLETMDKRQALQEVRKLKDTLEKDAENCHWLQKFL* 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03734 940 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 58 861 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Rops2g03734 940 Gene3D MutS, connector domain 123 292 IPR036678 GO:0005524|GO:0006298|GO:0030983
Rops2g03734 940 Pfam MutS domain III 301 605 IPR007696 GO:0005524|GO:0006298|GO:0030983
Rops2g03734 940 CDD ABC_MSH2_euk 629 859 IPR032642 GO:0005524
Rops2g03734 940 FunFam DNA mismatch repair protein 123 292 - -
Rops2g03734 940 Pfam MutS family domain IV 468 565 IPR007861 GO:0005524|GO:0006298|GO:0030983
Rops2g03734 940 SUPERFAMILY DNA repair protein MutS, domain III 298 610 IPR036187 -
Rops2g03734 940 Gene3D DNA repair protein MutS, domain I 9 122 IPR016151 GO:0005524|GO:0006298|GO:0030983
Rops2g03734 940 FunFam DNA mismatch repair protein MSH2 512 615 - -
Rops2g03734 940 Pfam MutS domain I 24 129 IPR007695 GO:0005524|GO:0006298|GO:0030983
Rops2g03734 940 FunFam DNA mismatch repair protein MSH2 616 936 - -
Rops2g03734 940 FunFam DNA mismatch repair protein 8 122 - -
Rops2g03734 940 Coils Coil 472 492 - -
Rops2g03734 940 Pfam MutS domain V 661 859 IPR000432 GO:0005524|GO:0006298|GO:0030983
Rops2g03734 940 Gene3D - 295 520 - -
Rops2g03734 940 Gene3D - 521 615 - -
Rops2g03734 940 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 615 860 IPR027417 -
Rops2g03734 940 Coils Coil 552 572 - -
Rops2g03734 940 Coils Coil 371 391 - -
Rops2g03734 940 Pfam MutS domain II 144 284 IPR007860 GO:0005524|GO:0006298|GO:0030983
Rops2g03734 940 SMART mutATP5 658 856 IPR000432 GO:0005524|GO:0006298|GO:0030983
Rops2g03734 940 Gene3D - 616 937 IPR027417 -
Rops2g03734 940 Coils Coil 912 932 - -
Rops2g03734 940 SMART DNAend 315 641 IPR007696 GO:0005524|GO:0006298|GO:0030983
Rops2g03734 940 ProSitePatterns DNA mismatch repair proteins mutS family signature. 739 755 IPR000432 GO:0005524|GO:0006298|GO:0030983
Rops2g03734 940 PIRSF MSH2 8 940 IPR011184 GO:0005524|GO:0006298|GO:0030983
Rops2g03734 940 FunFam DNA mismatch repair protein 295 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03734 Rops-Chr2 69105090 69114743 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03734 K08735 - gmx:100792272 1685.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03734 2 69105090 69114743 Rops2g03734 2 69105090 69114743 ECH