Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03731 ATGAAGTTGGTTGCAACCATTTCCTTCGTAAAGGTTTTTTTTGTGAATATATTGATGGGTAGTGGAACACTTGAAATGAATCATGTAACAAGTAGGGAAGCTGAGAACAGTCTTCACAAGCAAGCTGATCAAGCTTCCGCTGAAGGGTTTATAGGAAGAAGCGATAATTTGCCCGATGATGCAGTTGCAGACACCCTTCAGCTTGAAGCCAAGGCACATCCTGATGCTCCAAAAAGAGACAGGCAGCACAAGGAATTAACTTTCCAAGACATTTATCACCAAAACCAAGACATGTTTGACGACGACGACGACGACGATAGTGATTGGGACCCGTTTCAGTTACACAATTGTGTGGAAGTTGCCAAGTGGTTCTGCACAAATTGTACCATGGTTAACCTAGATGACGTTGTCCGTTGCAATATATGTGGGGAGCATAAAAATTCTAAAATCCTGAGCCATGGGTTTTTTGCATCTCCCTCTGCAGAAGATGAGGATCCAACTGAGGTCCAGCCAAATATAAAAGGACAGAGAGATGTTGGCTCACAATCTGCAGCAAATAGTTCCACAGCAATCGGCTTTGATGAGAGAATGTTGTTACATGCAGAAGTTGAAATGAAATCACATCCACACCCTGAAAGGCCAGATCGTCTTCGAGCCATTGCTGCTAGTCTTGCTAGAGCTGGTATATTTCCTGGAAGATGCTATCCAATTTCTGCTAGAGAAATAACTCGAGAAGAACTTACTATGGTTCATTCTTTGGAGCATGTTGAATCTGTGGAAGTTACAAGCAATTTATTGTCTAGTTATTTCACTGCTGACACATATGCAAATGAGCATTCAGCACGTGCTGCCAGGTTGGCAGCTGGGTTATGTGCTGATCTGGCATCGGCAATTGTTTCTGGACGTGCCAAAAATGGATTTGCTTTGGTTAGGCCTCCTGGTCATCATGCTGGTGTGAGACATGCGATGGGGTTCTGCCTTCATAATAATGCTGCAGTGGCAGCATTGGCAGCTCAGGCTGCAGGGGCTAGGAAGGTGCTAATTTTGGATTGGGATGTTCATCATGGAAATGGGACACAGGAAATATTTGAGCAAAACAAATCAGTCTTGTATATATCATTGCATAGACATGAGGGAGGAAAGTTTTATCCTGGTACTGGAGCTGCTGATGAGGTTGGTAGCATGGGTGCAGAAGGATACTGTGTAAATATTCCATGGAGTCGAGGAGGAGTCGGTGATAGTGATTACAGTTTTGCATTTCAGCATGTTGTCCTTCCTATTGCTTCTGAGTTTGCTCCAGATTTTACCATAATATCAGCCGGATTTGATGCTGCTAGAGGTGATCCCCTAGGATGTTGCGATGTTACTCCCTCTGGCTATGCACATATGACACGCATGTTAAATGCCCTATCTGGTGGAAAATTGCTTGTCATTCTGGAGGGGGGCTATAATCTCCGTTCTATTTCATCTTCAGCAACTGCAGTAATCAGGGTATTGCTGGGTGAGAGTCCTGGATGTGAACTGGAAAATAGTTTCCCTTCCAAAGCTGGCCTGCAAACTGTTCTGGATGTCCTCCAAATTCAGATGAATTTTTGGCCTTCTTTGGGACCTATCTTTTTAAGTTTGCAGTCACAATGGAAAATGTACTGTCTTGGAAAAAAAAAAAAACAGGTTAAGAAGAGACGCCGAGTTCTGGCACCATTGTGGTGGAGGCAAGGAAATGAAGCATCGAACACTCCGGAGTCAAGATGTCCCATAAGCAATTTCTTGATGGAGGCTGTTGAGTGGACCTCCCAATTCTCAATTCAAGCTAAACCTGAAAGTTTCATCCGAGTTTACATGTTACATAGTGCAATAGCTACTTCATAA 1869 0.435 MKLVATISFVKVFFVNILMGSGTLEMNHVTSREAENSLHKQADQASAEGFIGRSDNLPDDAVADTLQLEAKAHPDAPKRDRQHKELTFQDIYHQNQDMFDDDDDDDSDWDPFQLHNCVEVAKWFCTNCTMVNLDDVVRCNICGEHKNSKILSHGFFASPSAEDEDPTEVQPNIKGQRDVGSQSAANSSTAIGFDERMLLHAEVEMKSHPHPERPDRLRAIAASLARAGIFPGRCYPISAREITREELTMVHSLEHVESVEVTSNLLSSYFTADTYANEHSARAARLAAGLCADLASAIVSGRAKNGFALVRPPGHHAGVRHAMGFCLHNNAAVAALAAQAAGARKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGKFYPGTGAADEVGSMGAEGYCVNIPWSRGGVGDSDYSFAFQHVVLPIASEFAPDFTIISAGFDAARGDPLGCCDVTPSGYAHMTRMLNALSGGKLLVILEGGYNLRSISSSATAVIRVLLGESPGCELENSFPSKAGLQTVLDVLQIQMNFWPSLGPIFLSLQSQWKMYCLGKKKKQVKKRRRVLAPLWWRQGNEASNTPESRCPISNFLMEAVEWTSQFSIQAKPESFIRVYMLHSAIATS* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03731 622 ProSitePatterns Zinc finger RanBP2-type signature. 123 142 IPR001876 -
Rops2g03731 622 SUPERFAMILY Arginase/deacetylase 186 533 IPR023696 -
Rops2g03731 622 CDD HDAC_classII 210 500 - -
Rops2g03731 622 FunFam Histone deacetylase 15 182 554 - -
Rops2g03731 622 Gene3D Histone deacetylase domain 181 559 IPR037138 -
Rops2g03731 622 ProSiteProfiles Zinc finger RanBP2 type profile. 119 148 IPR001876 -
Rops2g03731 622 PANTHER HISTONE DEACETYLASE 9-RELATED 181 537 IPR017320 GO:0000118|GO:0004407|GO:0006325|GO:0016575
Rops2g03731 622 Pfam Histone deacetylase domain 210 498 IPR023801 -
Rops2g03731 622 MobiDBLite consensus disorder prediction 157 186 - -
Rops2g03731 622 PRINTS Histone deacetylase superfamily signature 345 360 IPR000286 -
Rops2g03731 622 PRINTS Histone deacetylase superfamily signature 312 335 IPR000286 -
Rops2g03731 622 PRINTS Histone deacetylase superfamily signature 433 443 IPR000286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03731 Rops-Chr2 69063172 69073899 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03731 - - gmx:100804724 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03731 2 69063172 69073899 Rops2g03731 2 69063172 69073899 ECH