Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03407 ATGGCACCTTCTTACTGTGTGAAGGAGGGGAAACCTTGTGTGGGATGGGTTGAGACATACTTCAGAGACTGCCTTTGCAACTTGAAAGATGAAATCTCGTTCGGTTTCGGGCTCACAAGTCTTGTATTCTGGGGAGTAGCAGAAATTCCTCAGATAATCACCATTTTTCGCACCAAGACCAACCATGGAGTCTCCCTTGCTTTTCTCCTCACATGGGTTGCTGGTGACATATGTAACCTGGTGGGTTGTCTTCTGGAACCAGCTACGTTGCCGACACAGTATTACACAGCTCTGCTTTACACAGCCACTACGATCGTATTACTACTGCAAATCATATATTATGACTACATCTGCAGATGGTGCAAACATCGTCAGAAGATCAACAATAAAGGGGCTCAGGAAGAAGAGAAAAAACCATTGAAACCGAAACCAAGTCACGATTCAGGGATTCCAATACCAAAAGACACACCCAAAGCAGCACCTCGACGGGAGTACTACTATATGTCAGCAAGATCGTTGGCTGGGAGTGCCACTCCACCCTCACTTACTTACATGAGAGCTGTTAAAAGTGGCCCTTCAGCCATGGAATTGGACTGCGACTCTTCTTCTGAGGATGAAGCATCTCCAGCTCAGCCTAGGCCCATACCACGTTCAACGGCTGGAAGTTATGGAACATTTCTAGCTGCATCAGTTAACTTGCCCCTGAAGAGTAATGCTATGAGAGAAGGATACATGGGATTTGGTGGAAGAAAGCTCTTGCAGGAGCACCAGGTCCATAGTACATTTGGTCAATGGTTGGGATGGCTCATGGCTGCTATTTATATAGGTGGTAGGCTTCCTCAAATATGGTTGAACATTAAAAGAGGAAGTGTGGAGGGCTTAAATCCTTTCATGTTCGTCTTTGCACTGATCGCTAATGTCGCTTACATGGGAAGTATTCTTGTACGAACAACAGAATTCCAAAGCATTAAAGCTAATATGCCATGGTTGTTGGATGCTGCAGTTTGCGTGGCACTGGACCTTTTTATAATATTGCAGTACATCTACTATAGATACTTTCGAAGGAAAGAAAGAAGTAATGATGGAGACTACAAAGAAGTGGGAAAAGCTGCTCCATCTTGA 1122 0.4465 MAPSYCVKEGKPCVGWVETYFRDCLCNLKDEISFGFGLTSLVFWGVAEIPQIITIFRTKTNHGVSLAFLLTWVAGDICNLVGCLLEPATLPTQYYTALLYTATTIVLLLQIIYYDYICRWCKHRQKINNKGAQEEEKKPLKPKPSHDSGIPIPKDTPKAAPRREYYYMSARSLAGSATPPSLTYMRAVKSGPSAMELDCDSSSEDEASPAQPRPIPRSTAGSYGTFLAASVNLPLKSNAMREGYMGFGGRKLLQEHQVHSTFGQWLGWLMAAIYIGGRLPQIWLNIKRGSVEGLNPFMFVFALIANVAYMGSILVRTTEFQSIKANMPWLLDAAVCVALDLFIILQYIYYRYFRRKERSNDGDYKEVGKAAPS* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03407 373 MobiDBLite consensus disorder prediction 131 158 - -
Rops2g03407 373 MobiDBLite consensus disorder prediction 194 219 - -
Rops2g03407 373 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 5 354 - -
Rops2g03407 373 Pfam PQ loop repeat 263 320 IPR006603 -
Rops2g03407 373 Pfam PQ loop repeat 32 88 IPR006603 -
Rops2g03407 373 FunFam Vacuolar membrane PQ loop repeat protein 262 360 - -
Rops2g03407 373 Gene3D - 35 128 - -
Rops2g03407 373 Gene3D - 262 364 - -
Rops2g03407 373 SMART ctns 46 77 IPR006603 -
Rops2g03407 373 SMART ctns 276 307 IPR006603 -
Rops2g03407 373 FunFam PQ loop repeat family protein 33 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03407 Rops-Chr2 62615543 62621602 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03407 K23678 - gmx:100789634 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03407 2 62615543 62621602 Rops2g03407 2 62615543 62621602 ECH
Rops1g01698 1 35657498 35660315 Rops2g03407 2 62615543 62621602 PCT