Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03380 ATGAGATATAGGATTTCTTATTTGATGGATGAGATCTGGGAGAAGGCTGTGGAAACGGCGTTAGACGGCGAGAAGGATTACAACTCCGCTCGAACCCTAACCCTTGACAGCGCCGTTAAGTGTGTGCAAGGACGGTTACCCCCACCGAGCCTTCTAGAAAGGTTCGACAACCTTCAGCACCTTTCGATTGCAAACGTCGGCGTTTCATCGCTTGAACAGTTCCCGAGGCTTCGGAATCTTCAGAAGTTGAACCTCTCCGACAACCGGATCGCCGGCGGGCTCGAGTTTCTGGTCCAAGCGGGTCTCGATTCGCTTCGTGACCTTGATTTATCCAACAATCGGATTCAGTTCATCGAGGATCTCGCGCCACTTGCGCAGGTGAAGCTTGTTTCGTTGGATCTGTATGAGTGTCCTGTTACGAGGGTCAAGGATTATCGATCTAGGGTTTTTGCTTTGATTAAGTCGTTGAAGTTTTTGGATAAGATGGATGCCGAGGGGAACGAGAGGCCGGAGAGTGATGACGAGGAAGAGGAGGAAGATGAGGAGGAGGAAGAAGAAGAGGATGACCCTGGGAGTGGTGAGATTGATGGGGAAGAGGATCGACCGTTTGGGATGAACAACGGTCACAGTGAAGGTGGTGTTGATGGTGTTGTTGATGCTGATGAGGAAGAAGAGAGTGATGCGGATGAAGAGGAGACGGAGACGAGGAGGGTGAATAATGGGTCGAGTCATCAGGAGAATGGGTTTCGAGTTGCGCCTGTTGTTGGGGATGATGTGGAGGAAGAAGATGATGATGATGATTCCGGGGAGGAGATTGATGAGGAGGAGGGGGATGATGATGATGTGGTTGAGGTTCATGAGATTGAAGATAGTGATGATGAGGAGGATGGGGTTGAGTATGATGAGGATGATGATGATGAGGATGACGAAGAGGTGGATAATGATGAAGGGGATTTTGCTGAACCGGAGAGTACCGGAAGGGAGAGTACCGGAAGGTTGACAAGCACGGAAGGTGAGATCGATGGGCATGAGCAAGGGGAGGAAGATGGAGATGAAGATGATAATGGGGAGACTGGGGAAGATGAGATGGGGGTAGAAGAAGATGATGGGGAGTTTGAAGATGATGATGAGGACGAAGACTGTGGAGCTGGATATCTTGTTCAGCCAGTTGGACAGTCTGAGGCTCCAAATGCTGGGGATGCTGACGTGGATGGTGGAAATGATGATGGTGAAGAGGAAGAGGAAGTTGATGATGATGAGGAAGATGATGTTCAGGTGTTGCCTTCTGCCTCTTCACACCCCAAGAGGAAGAGGGATGATGAAGATGATGATGATGAGTACGATGAAGATGATGAGGACGTGGTAGCATTCACAAAATCATCCAAGAAGCATCATTGA 1398 0.495 MRYRISYLMDEIWEKAVETALDGEKDYNSARTLTLDSAVKCVQGRLPPPSLLERFDNLQHLSIANVGVSSLEQFPRLRNLQKLNLSDNRIAGGLEFLVQAGLDSLRDLDLSNNRIQFIEDLAPLAQVKLVSLDLYECPVTRVKDYRSRVFALIKSLKFLDKMDAEGNERPESDDEEEEEDEEEEEEEDDPGSGEIDGEEDRPFGMNNGHSEGGVDGVVDADEEEESDADEEETETRRVNNGSSHQENGFRVAPVVGDDVEEEDDDDDSGEEIDEEEGDDDDVVEVHEIEDSDDEEDGVEYDEDDDDEDDEEVDNDEGDFAEPESTGRESTGRLTSTEGEIDGHEQGEEDGDEDDNGETGEDEMGVEEDDGEFEDDDEDEDCGAGYLVQPVGQSEAPNAGDADVDGGNDDGEEEEEVDDDEEDDVQVLPSASSHPKRKRDDEDDDDEYDEDDEDVVAFTKSSKKHH* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03380 465 ProSiteProfiles Leucine-rich repeat profile. 79 98 IPR001611 GO:0005515
Rops2g03380 465 PANTHER ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 15 448 IPR045081 -
Rops2g03380 465 MobiDBLite consensus disorder prediction 342 382 - -
Rops2g03380 465 MobiDBLite consensus disorder prediction 404 425 - -
Rops2g03380 465 MobiDBLite consensus disorder prediction 217 231 - -
Rops2g03380 465 MobiDBLite consensus disorder prediction 169 195 - -
Rops2g03380 465 SUPERFAMILY L domain-like 48 164 - -
Rops2g03380 465 ProSiteProfiles Leucine-rich repeat profile. 104 125 IPR001611 GO:0005515
Rops2g03380 465 FunFam acidic leucine-rich nuclear phosphoprotein 32-related protein-like 13 175 - -
Rops2g03380 465 Pfam Leucine-rich repeat 58 172 - -
Rops2g03380 465 MobiDBLite consensus disorder prediction 163 465 - -
Rops2g03380 465 Gene3D Ribonuclease Inhibitor 10 175 IPR032675 -
Rops2g03380 465 MobiDBLite consensus disorder prediction 257 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03380 Rops-Chr2 62171550 62175390 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03380 - - gmx:100783409 432.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03380 2 62171550 62175390 Rops2g03380 2 62171550 62175390 ECH