Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03360 ATGAGTTTCAGGGAAGACAGTGGGGAAGGTAGGGATCTTCAGAAACCGTTCCTCCACACGGGGAGTTGGTACAGAATGGGTTCAAGGCAATCCAGTATTATGAGTTCCACTACTCAGGTCATGCGCGATGGTTCCGTTTCTGTTCTCTTCTGTGTACTCATCGCCGCCTTGGGTCCCATTCAATTCGGATTCACGTGTGGATATTCTTCTCCGACGCAAGAGGCTATAATTAGCGATCTGAAGCTCTCGGTTTCGGAGTTCTCGTTGTTTGGATCTTTATCGAATGTGGGTGCGATGGTGGGAGCTATAGCAAGTGGTCAGATAGCAGAATACATCGGGCGCAAAGGGTCATTGATGATTGCTGCAATTCCCAATATAATAGGGTGGCTCGCCATTTCTTTCGCTAAAGACTCCTCGTTTTTGTTCATGGGGAGGTTGTTGGAAGGTTTTGGCGTTGGGATTATCTCTTATGTGGTGCCTGTTTATATAGCTGAGATAGCACCTGAAAACATGAGAGGTGGCCTTGGATCAGTGAACCAGCTTTCTGTTACAATTGGAATATTGGTGGCTTATCTGTTGGGCCTTTTTGTCAATTGGAGAGTGCTTGCAATTATAGGAATTTTGCCTTGTACAGTATTAATACCTGGATTATTTTTCATACCAGAATCTCCTAGATGGTTGGCCAAAATGGGGATGACAGATGAGTTTGAGACTTCTTTGCAAGTGTTACGAGGATTTGACACAGATATCTCTGTTGAAGTACATGAAATTAAGAGATCTATGGCAACAACGGGAAAAAGAGTTACTATCCGGTTTGCAGATCTCAAGAGGAAAAGATATTGGTTCCCATTAATGGTAGGAATTGGATTGCTTGTACTTCAGCAATTGAGTGGTATCAATGGAGTTTTGTTCTATTCAAGTAGCATCTTTGCAACTGCAGGAATTTCGTCCAGCAATGCTGCTACAGTGGGACTTGGAGCTATTCAGGTCATTGCAACTGGAGTTGCTACATGGTTGGTGGACAAAAGTGGAAGGAGGCTGCTTCTAATATTATCCTCATCTTTAATGACAGTTAGCCTTCTCGTTGTTTCTATAGCATTCTATCTGGAGGGAACTGTATCAGAGGATTCGCATCTATACAAAATTTTGGCAATAATTTCTGTTGTTGGCCTTGTGGTTATGGTAATTGGATTCTCTCTAGGACTTGGACCAATCCCTTGGCTTATAATGTCCGAGATACTTCCAGTAAATATAAAGGGCCTGGCTGGCAGTGTAGCAACCATGGGTAATTGGCTGACTGCATGGGTGATCACAATGACTGCAAACTTGCTTTTGACTTGGAACAAGGGAGCAACATTCACAATCTACACAGTGATAGCTGCCTTTACTGTTGCTTTCACATCAATATGGGTCCCTGAGACCAAGGGAAGAACATTGGAAGAAATTCAGTTTTCCTTTAGATGA 1464 0.4317 MSFREDSGEGRDLQKPFLHTGSWYRMGSRQSSIMSSTTQVMRDGSVSVLFCVLIAALGPIQFGFTCGYSSPTQEAIISDLKLSVSEFSLFGSLSNVGAMVGAIASGQIAEYIGRKGSLMIAAIPNIIGWLAISFAKDSSFLFMGRLLEGFGVGIISYVVPVYIAEIAPENMRGGLGSVNQLSVTIGILVAYLLGLFVNWRVLAIIGILPCTVLIPGLFFIPESPRWLAKMGMTDEFETSLQVLRGFDTDISVEVHEIKRSMATTGKRVTIRFADLKRKRYWFPLMVGIGLLVLQQLSGINGVLFYSSSIFATAGISSSNAATVGLGAIQVIATGVATWLVDKSGRRLLLILSSSLMTVSLLVVSIAFYLEGTVSEDSHLYKILAIISVVGLVVMVIGFSLGLGPIPWLIMSEILPVNIKGLAGSVATMGNWLTAWVITMTANLLLTWNKGATFTIYTVIAAFTVAFTSIWVPETKGRTLEEIQFSFR* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03360 487 PRINTS Sugar transporter signature 294 304 IPR003663 GO:0016020|GO:0022857|GO:0055085
Rops2g03360 487 PRINTS Sugar transporter signature 388 409 IPR003663 GO:0016020|GO:0022857|GO:0055085
Rops2g03360 487 PRINTS Sugar transporter signature 411 423 IPR003663 GO:0016020|GO:0022857|GO:0055085
Rops2g03360 487 PRINTS Sugar transporter signature 142 161 IPR003663 GO:0016020|GO:0022857|GO:0055085
Rops2g03360 487 PRINTS Sugar transporter signature 59 69 IPR003663 GO:0016020|GO:0022857|GO:0055085
Rops2g03360 487 FunFam sugar transporter ERD6-like 6 42 486 - -
Rops2g03360 487 SUPERFAMILY MFS general substrate transporter 52 483 IPR036259 -
Rops2g03360 487 CDD MFS_GLUT6_8_Class3_like 49 481 IPR044775 GO:0008643|GO:0051119
Rops2g03360 487 ProSiteProfiles Major facilitator superfamily (MFS) profile. 51 475 IPR020846 GO:0022857
Rops2g03360 487 Gene3D MFS general substrate transporter like domains 42 487 IPR036259 -
Rops2g03360 487 NCBIfam sugar porter family MFS transporter 32 482 IPR003663 GO:0016020|GO:0022857|GO:0055085
Rops2g03360 487 ProSitePatterns Sugar transport proteins signature 1. 105 122 IPR005829 GO:0016020|GO:0022857|GO:0055085
Rops2g03360 487 Pfam Sugar (and other) transporter 52 483 IPR005828 GO:0016020|GO:0022857|GO:0055085
Rops2g03360 487 ProSitePatterns Sugar transport proteins signature 2. 147 172 IPR005829 GO:0016020|GO:0022857|GO:0055085
Rops2g03360 487 PANTHER - 37 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03360 Rops-Chr2 61797489 61808291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03360 1 487 Organic Solute Cotransporters AT1G75220 77.664 0.0 765
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03360 K03444 - gmx:100813399 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03360 2 61797489 61808291 Rops2g03360 2 61797489 61808291 ECH