Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03301 ATGGACACTTTGACAGTGCTTCCTCCTCCTTGGATTCCCGAAGATGACCTTCTCCTTAAAAACGCCGTTGAGGCTGGGGCTTCGTTGGAATCGCTGGCCAAAGGAGCTGTTCGATTCTCCCGGAGATATTCCGTTACGGAATTGGAAGATCGGTGGCGTTCTCTTCTATACGATCCTGATGTTTCGGCTGAAGCTTCTGTTTCAATGGCGAATTTGGAGCTTAACAAGTCTAACGGGAACGGAATCAGGGAAATCTCCGGCGACGGTGACAGGAAGAGGAAAATTCAGAGCATTCGGAAGCAGTATTACGCCATGCGGAAGAGATTTTGCTGGCAGGCTTTTGATTCTTTCGATATGGCGTTGCGTGATGAGATGAGCATTGAGAAGAACGTGGAGATTGGTGGTAATTTAAATAAGGAAATGAATAATTTGCTTGTGAATAATTTAGTTGATTATGGGAATTTAGAGGATGCAGGGGTGGGGTCATCTCATTCAATGAGTGATGTTGTTCCTATTTGGAGAACAATTGATGATGTCTCTGTCCCTGCTATGCCTATTGAAAATGAAAATTGTAGTTCCGAAGGTTTGAAAGGTAAATGTGGAAATGATGTGTTGAATGTTCCTTCTGGTGCTGTGTTAGGAGATGAGGATACACATATTTCTGATTCTCTTTTGAATTTGACAAATGAGGATGAGCTTCTGTTTATGGATATAGATGGGAAAGAGGAGTCCGTGACAGTGGCCGGGACGGATAAGCCGTGTTATGATAATGTTGATTCGCTTATTTTGAGTTCTCCTTGTGATGTTGTTCAGGGTAATGATGCATTTCATAGTCGTGAATCTCACAAGTCAGGTGCAGAAACAAAACTTGCTATGCCGAGTGGGGCATCTGTGGCCGGGTTAGAGGTTGCTAACCCATCAGGCAGTAGTTGTGGTGATCGGCATATTGTTTCTGATCCTGGAAATGAAGTCCAGTCATCTGCTGCTGCACAAAGTTCTCACCCTGCACATGGTGAGGGATTTATGATCTGTGTATTGAACACTGAGGACCCTGATGTCCCGTGCAATGACAGTGCTAACGTATCCGTTGTAGTTCCTCATTCAGTGACTTTGAAATCTCAACCAATTGTTAAAGAGGTGGGTTATCCAGATTCCTCTATTAACAATCAAAGAAAAAAGGAGCAAGACGGAAGGTTGAAGAAAGAAGACATTCCTTCACGCTCTCTTGCAGCTTTGCAGACAGTTCGACCGGTGTTAGTGCCTGACATAAGTTCAAGTAACTCGCCTGTTGGTGTTGTACAGAAAACTGAAAATCCTACAAGGAAGCCTATTTCTGCAGTTTCTAGACTGAGTAACAATGTTGTTGTTAACATCAACCCAAGTCACAGCAGATCAGTTCATGCAACTATGACGCCTGCCTCAGATGGACATCTGAAACAAGAGGAAATTGATGCTTCGGCTTCAGCTGAAGTTTATGCTCATACAAACGCAGAGGAACATAGGGCTTTACCTCAATCGGAGGCAAGATCATTACCTCTCAATCAGGAAGGAGGTGATGACGACGACAATGACGACGATGACGGTGATGATGACAATGACGATGACAATGAAATTCCTTACTTTTCTGATGCTGAGGCAATGATTCTTGAGATGGATTTAAGTCCAACTGATCACGACATAAATGCAAGTAAAGAAGTCTTGAGATATCAACATGAAGAAACTAAGAGGACCATCATGAGATTGGAGCAATGTGCTCAGTCCTTTATGCGAAGAGCCATTGCATCTCGAGGTGCACTTGCAGTGTTGTATGGGCGCCATCTGAAGCAATATATTAAGAAAACCGAGGTTATACTTGGCAGAGCGACCGATGATGTACAAGTGGATATTGACTTGGGAAGAGAAGGGCGAGCTAACAAAATATCTAGAAGACAAGCTTTAATAAAGATGGAAGCAAATGGTTCTTTCATTATTAAAAATCTTGGCAAGAGTTCCATCTTCTTGAATGGCAAAGAAGTTGCTACAGGACAGATGCGGGGTCTTAATGCTGGTAGTTTGATAGAGATTAGAGGCATGTCATTCATCTTTGAGGTCAATAACAAATGCGTGCAGAGGTTTTTAGAAAATGTGAATGAAAATAGAGAGAAATAA 2148 0.4274 MDTLTVLPPPWIPEDDLLLKNAVEAGASLESLAKGAVRFSRRYSVTELEDRWRSLLYDPDVSAEASVSMANLELNKSNGNGIREISGDGDRKRKIQSIRKQYYAMRKRFCWQAFDSFDMALRDEMSIEKNVEIGGNLNKEMNNLLVNNLVDYGNLEDAGVGSSHSMSDVVPIWRTIDDVSVPAMPIENENCSSEGLKGKCGNDVLNVPSGAVLGDEDTHISDSLLNLTNEDELLFMDIDGKEESVTVAGTDKPCYDNVDSLILSSPCDVVQGNDAFHSRESHKSGAETKLAMPSGASVAGLEVANPSGSSCGDRHIVSDPGNEVQSSAAAQSSHPAHGEGFMICVLNTEDPDVPCNDSANVSVVVPHSVTLKSQPIVKEVGYPDSSINNQRKKEQDGRLKKEDIPSRSLAALQTVRPVLVPDISSSNSPVGVVQKTENPTRKPISAVSRLSNNVVVNINPSHSRSVHATMTPASDGHLKQEEIDASASAEVYAHTNAEEHRALPQSEARSLPLNQEGGDDDDNDDDDGDDDNDDDNEIPYFSDAEAMILEMDLSPTDHDINASKEVLRYQHEETKRTIMRLEQCAQSFMRRAIASRGALAVLYGRHLKQYIKKTEVILGRATDDVQVDIDLGREGRANKISRRQALIKMEANGSFIIKNLGKSSIFLNGKEVATGQMRGLNAGSLIEIRGMSFIFEVNNKCVQRFLENVNENREK* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03301 715 SMART FHA_2 615 672 IPR000253 GO:0005515
Rops2g03301 715 Pfam FHA domain 616 688 IPR000253 GO:0005515
Rops2g03301 715 FunFam Microspherule protein 1 559 708 - -
Rops2g03301 715 Gene3D - 557 710 - -
Rops2g03301 715 MobiDBLite consensus disorder prediction 381 403 - -
Rops2g03301 715 PANTHER MICROSPHERULE PROTEIN 1 10 713 IPR037912 GO:0002151|GO:0031011|GO:0071339
Rops2g03301 715 MobiDBLite consensus disorder prediction 426 446 - -
Rops2g03301 715 MobiDBLite consensus disorder prediction 498 538 - -
Rops2g03301 715 ProSiteProfiles Forkhead-associated (FHA) domain profile. 616 672 IPR000253 GO:0005515
Rops2g03301 715 MobiDBLite consensus disorder prediction 389 403 - -
Rops2g03301 715 Pfam N-terminal region of micro-spherule protein 11 73 IPR025999 -
Rops2g03301 715 Coils Coil 699 715 - -
Rops2g03301 715 CDD FHA_MCRS1 594 698 - -
Rops2g03301 715 MobiDBLite consensus disorder prediction 301 334 - -
Rops2g03301 715 SUPERFAMILY SMAD/FHA domain 608 698 IPR008984 GO:0005515
Rops2g03301 715 MobiDBLite consensus disorder prediction 517 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03301 Rops-Chr2 60435858 60440395 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03301 - - pcin:129322972 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03301 2 60435858 60440395 Rops2g03301 2 60435858 60440395 ECH