Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03299 ATGGGGTCTCTCAGTTTCCCCTATTTTCATCTATTACTGATCCTTGTAGTCTCATTTGCCTTATTCGTTGCAGAATCAAAGACATATTGGGGAGACACAGGGGTTTTGAAAGAACTAAAGAACAACCTCGACCCTGCTTCTGTGAGTCCAGGTTCATGTGTAAACTCATGGGACTTCACTGTTGACCCATGCAACAACCTCTTCAGTGAAAGGTTCACGTGCGGGTTCAGATGCGACATTGTCGTGTCAGGAACGAGTCGAGTCACCGAACTCAGTCTTGACCAGGCGGGTTATGCTGGATCGTTCACCACCACTTGGAACCTTCCATACCTTGAAACTCTCGATATCTCAAACAACTACTTCTCAGGCCAAATCCCCGAGTCATTATCCAACTTGACTCGGCTGAGTCGACTCGGTTTGTCAAGAAACTCGTTCACCGGTGAGATACCCTCTTCCATTGGGTCTCTCGTTAACCTCGAAGAGCTTTACCTCGATACCAATAACCTTCAAGGAACAATCCCAGCGAGTTTTAATGGCCTCAAAAACCTTAAAAGGCTCGAAATTCAATTCAACAAACTAAACGGTGAGCTTCCGAATTTGGGTTCTCTGAAAAACCTTTATTACTTGGACCTAAGTGACAATGCCATCACCGGAGGGTTGCCGGCGACGTTACCGGAATCTTTGGTTCAGATTTCGATGAGGAACAATTGCTTAAGTGGTGCATTAGCCTCCGAAAGATTTAAGAATTTGACGTATTTGCAGGTTGTGGATTTGAGTCACAACAAGTTTAATGGTTCGGTTCCTTTTGTTCTATTTGAGCTTCCATCGTTGCAGCAACTAACACTCTCTTACAACCAATTCTCTTCAATGCAAGTGCCTTCTAATGCTTTGAACTTGCAAAGTGGGGTCATAGCGGTTGATCTGAGTAACAATGAGCTTCAGGGGATTTTGCCAATGTTCATGGCTTTGATGCCAAAGCTTTCATCTTTGTCTTTGGAGAACAACAAGTTCAGTGGTATGATACCGACCCAGTACGCGTTGAAAACGGGTTTTCCTGAACCTGGGGTTTCTCCATTTGAGAGGCTTCTGTTGGGTGGGAATTACTTGTTTGGAGGTATACCAAGTCCTCTAATGGCACTTGAACCTGGTTCAGCAAATGTGAGGCTTGTTGATAATTGCTTATATAGGTGTCCTCTTAATTTCTTTTTCTGTCAGGGTGGGGAACAAAAATCTTCTGAAGGATGTAAGAGATTCAGTCACTTCATCCCTTAG 1272 0.441 MGSLSFPYFHLLLILVVSFALFVAESKTYWGDTGVLKELKNNLDPASVSPGSCVNSWDFTVDPCNNLFSERFTCGFRCDIVVSGTSRVTELSLDQAGYAGSFTTTWNLPYLETLDISNNYFSGQIPESLSNLTRLSRLGLSRNSFTGEIPSSIGSLVNLEELYLDTNNLQGTIPASFNGLKNLKRLEIQFNKLNGELPNLGSLKNLYYLDLSDNAITGGLPATLPESLVQISMRNNCLSGALASERFKNLTYLQVVDLSHNKFNGSVPFVLFELPSLQQLTLSYNQFSSMQVPSNALNLQSGVIAVDLSNNELQGILPMFMALMPKLSSLSLENNKFSGMIPTQYALKTGFPEPGVSPFERLLLGGNYLFGGIPSPLMALEPGSANVRLVDNCLYRCPLNFFFCQGGEQKSSEGCKRFSHFIP* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03299 423 Gene3D Ribonuclease Inhibitor 200 294 IPR032675 -
Rops2g03299 423 FunFam Nuclear pore complex protein NUP107 31 199 - -
Rops2g03299 423 SUPERFAMILY L domain-like 82 395 - -
Rops2g03299 423 Pfam Leucine Rich Repeat 111 132 IPR001611 GO:0005515
Rops2g03299 423 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 11 414 - -
Rops2g03299 423 SMART LRR_typ_2 203 227 IPR003591 -
Rops2g03299 423 SMART LRR_typ_2 274 299 IPR003591 -
Rops2g03299 423 SMART LRR_typ_2 156 179 IPR003591 -
Rops2g03299 423 SMART LRR_typ_2 108 132 IPR003591 -
Rops2g03299 423 SMART LRR_typ_2 324 347 IPR003591 -
Rops2g03299 423 Pfam Leucine rich repeat 241 287 IPR001611 GO:0005515
Rops2g03299 423 Pfam Leucine rich repeat 158 216 IPR001611 GO:0005515
Rops2g03299 423 Gene3D Ribonuclease Inhibitor 295 391 IPR032675 -
Rops2g03299 423 Gene3D Ribonuclease Inhibitor 31 199 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03299 Rops-Chr2 60412019 60413290 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03299 48 377 Receptor kinase-like Gene Family AT3G28890 33.333 5.02e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03299 - - adu:107478747 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03299 2 60412019 60413290 Rops2g03299 2 60412019 60413290 ECH