Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03298 ATGGCTGCACACACATTAACTGGTAAAACCACCTTGCTATGGATGTTCTTCCTCCCTCTCTCATCTCTTATCTCAACTTCGGAGGCCTGTCATGTGGTGGACAAAGAGACCTTACTAGAATTCAAGAGCAAGATCACCTCTGACCCTTCAAAATTGCTGCACTCTTGGACATCTTCCTCTGATTGTTGCCATCATTGGGAAGGTGTCACATGTGATTCTTCAGGCAGGGTTATCAACCTCACTCGTATTGGAGTTGCAGACTTCAAAGGCATCCCATTTGATACATACATGTCTGGAACATTGTCACCTTATCTTGGTAACTTATCTAATCTTCAAGTTTTGGACCTCAGACTTCTGAAGGAGTTGCATGGTCCAATACCTACAGAATTGGGTAAGTTATCTAATCTGAGACAACTTATTCTCTATTCAAACAAGCTTACAGGTGGTATACCAGAAGCATTCAACGTGCTTTCCAAGCTTGAGAATCTGTACCTTGATGACAATCACTTATCTGGTAACATTCCTTCATCTGTGTTTGCATTTTTGAAGTCTCTCTCAGAACTCAGTCTCTCTAGGAATAATCTGTCTGGTAGGATTCCATCTTCTATTGGGAGATTGGTGTTTCTCACTAGGCTTGATCTTCATCAAAACAATTTCAGTGGTGGTATTCCTGCAAGCATTGGGAATCTAAGAAATCTCAAAGATTTAGATTTGTCTAGGAATCAAATTAGTGGAAGAATCCCAGACTCAATTGGTAATCTTTCACAGTTAGTTTTACTAGATATGATGGAAAACCAGATTTCAGGAAGCCTTCCTTTTTCTATTGGGGACCTTAGTTCTCTAACATTCTGCAGGTTATCAGAAAACATGCTTACAGGCATTTTACCTTCTTCCATTGGAAAAATCAAGCATTTGCAATCATTGAATCTTCTGAACAACAAGCTAAGTGGGAATTTGCCTGTTTCCATTGGCCATCTAACCAATTTAAGTGATTTATTTCTTGCAAACAACCAATTTACAGGAAAAATTCCACCTTCCTTTGGCAATTTAATCAACCTGGATATACTAAATTTGTCAAGAAACCAACTTTCTGGTGGACTTCCCCCTCAACTTGCTAAATTACAAAGTTTGAGTACCTTAGACTTGTCATTCAATCCACTAGGACTAGCCAAGATACCCAACTGGTTTTCCAAATTGAGAGTTTCTCAGTTTCTATTGGCTAAAACAGGGATTAAAGGACAACTTCCAGAGTGGCTATCATCATCATCAATAGCAACCCTTGATTTGTCAAGCAATGCATTAAGTGGGAAACTGCCAAGGTGGATAGGAAACATGACTAGTCTTCAATTCCTTAACATGTCAAATAACGAATTTCGTTCATCAATCCCAGTAGAATTCAAGAACCTTTCTCTTCTGATGGACCTTGACCTCCATTCCAATAAACTCACTGGCACTCTTGAAGTGGTACTTGAGTGCATAGGCCATTTCAATTCCATTGACCTATCTAACAACATGTTTTCTGGTCCCATAGATGAGAACATTGGAGAAAAGACCTCAATGACTTCAATCAAATCCCTTGTTTTGTCACACAACCCATTGGGAGGATCTATACCCAAGTCAATTGGGAAACTGTGGGGACTAGAGATTCTGTACCTTGAGGACTGCAAGCTCTCAGGGAAGATACCTGCAGAGCTTGGTGATGTTGAAGCATTAACAAAGATTCATCTTTCAAAGAACATGTTAAGTGGCAACATACCAATGAAGATTCTAAATTTGAAGAATCTCGAAGAGTTCGATGTGTCAAGGAACCAACTCAGTGGGAGGATCCCTCCACATAAGGCCATGATTCCCAAATCAGCTTTTGTGGGTAATCCTGGATTGTGTGGGCAACCACTTCCTCCTTGTAAGCATTTTTAG 1917 0.4001 MAAHTLTGKTTLLWMFFLPLSSLISTSEACHVVDKETLLEFKSKITSDPSKLLHSWTSSSDCCHHWEGVTCDSSGRVINLTRIGVADFKGIPFDTYMSGTLSPYLGNLSNLQVLDLRLLKELHGPIPTELGKLSNLRQLILYSNKLTGGIPEAFNVLSKLENLYLDDNHLSGNIPSSVFAFLKSLSELSLSRNNLSGRIPSSIGRLVFLTRLDLHQNNFSGGIPASIGNLRNLKDLDLSRNQISGRIPDSIGNLSQLVLLDMMENQISGSLPFSIGDLSSLTFCRLSENMLTGILPSSIGKIKHLQSLNLLNNKLSGNLPVSIGHLTNLSDLFLANNQFTGKIPPSFGNLINLDILNLSRNQLSGGLPPQLAKLQSLSTLDLSFNPLGLAKIPNWFSKLRVSQFLLAKTGIKGQLPEWLSSSSIATLDLSSNALSGKLPRWIGNMTSLQFLNMSNNEFRSSIPVEFKNLSLLMDLDLHSNKLTGTLEVVLECIGHFNSIDLSNNMFSGPIDENIGEKTSMTSIKSLVLSHNPLGGSIPKSIGKLWGLEILYLEDCKLSGKIPAELGDVEALTKIHLSKNMLSGNIPMKILNLKNLEEFDVSRNQLSGRIPPHKAMIPKSAFVGNPGLCGQPLPPCKHF* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03298 638 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Rops2g03298 638 SUPERFAMILY L domain-like 87 272 - -
Rops2g03298 638 Gene3D Ribonuclease Inhibitor 32 198 IPR032675 -
Rops2g03298 638 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 275 368 - -
Rops2g03298 638 Pfam Leucine rich repeat 209 267 IPR001611 GO:0005515
Rops2g03298 638 Pfam Leucine rich repeat 328 387 IPR001611 GO:0005515
Rops2g03298 638 SUPERFAMILY L domain-like 212 609 - -
Rops2g03298 638 PRINTS Leucine-rich repeat signature 374 387 - -
Rops2g03298 638 PRINTS Leucine-rich repeat signature 233 246 - -
Rops2g03298 638 SMART LRR_typ_2 445 468 IPR003591 -
Rops2g03298 638 SMART LRR_typ_2 350 373 IPR003591 -
Rops2g03298 638 SMART LRR_typ_2 182 206 IPR003591 -
Rops2g03298 638 SMART LRR_typ_2 326 349 IPR003591 -
Rops2g03298 638 SMART LRR_typ_2 520 544 IPR003591 -
Rops2g03298 638 SMART LRR_typ_2 592 623 IPR003591 -
Rops2g03298 638 SMART LRR_typ_2 469 492 IPR003591 -
Rops2g03298 638 SMART LRR_typ_2 278 301 IPR003591 -
Rops2g03298 638 SMART LRR_typ_2 133 156 IPR003591 -
Rops2g03298 638 SMART LRR_typ_2 374 398 IPR003591 -
Rops2g03298 638 SMART LRR_typ_2 157 181 IPR003591 -
Rops2g03298 638 SMART LRR_typ_2 230 254 IPR003591 -
Rops2g03298 638 FunFam Nuclear pore complex protein NUP107 32 182 - -
Rops2g03298 638 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 12 510 - -
Rops2g03298 638 Gene3D Ribonuclease Inhibitor 390 638 IPR032675 -
Rops2g03298 638 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 183 274 - -
Rops2g03298 638 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 369 638 - -
Rops2g03298 638 ProSiteProfiles Leucine-rich repeat profile. 232 254 IPR001611 GO:0005515
Rops2g03298 638 SMART LRR_sd22_2 326 352 - -
Rops2g03298 638 SMART LRR_sd22_2 157 190 - -
Rops2g03298 638 SMART LRR_sd22_2 374 391 - -
Rops2g03298 638 SMART LRR_sd22_2 230 256 - -
Rops2g03298 638 SMART LRR_sd22_2 592 620 - -
Rops2g03298 638 Gene3D Ribonuclease Inhibitor 199 294 IPR032675 -
Rops2g03298 638 Gene3D Ribonuclease Inhibitor 295 389 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03298 Rops-Chr2 60400836 60402752 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03298 94 635 Receptor kinase-like Gene Family AT5G46330 34.965 1.02e-75 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03298 - - ccaj:109814120 906.746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03298 2 60400836 60402752 Rops2g03298 2 60400836 60402752 ECH