Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03238 ATGGTGCTCGAGGCGACGATGATCTGTATTGACAATTCCGAATGGATGCGTAACGGTGATTACTCTCCTTCTCGATTCCAAGCCCAAGCAGACGCTGTCAATCTTATTTGTGGTGCCAAAACCCAGTCTAATCCAGAAAATACAGTGGGAGTTCTCACGATGGCGGGGAAGGGGGTTCGAGTTTTGGTGACCCCTACCAGTGATTTGGGCAAGATCTTAGCTTGCATGCATGGACTAGAAATAGGTGGTGAGATGAACCTAGCTGCTGGCATTCAGGTGGCACAATTAGCTCTTAAGCATCGGCAAAATAAGAAGCAGCAGCAAAGGATTATTGTCTTTGCTGGAAGTCCTATCAAGCATGAGAAGAAAATGTTGGAGATGATTGGGAGAAAGTTGAAAAAGAATAGTGTGGCCCTTGACATTGTCAATTTTGGCGAAGAAGATGAGGGGAAGACAGAGAAGCTGGAAGCACTCCTTGCAGCTGTTAACAATAACGATACCAGCCACATGGTTCATGTTCCACCAGGTCCAAACGCTCTTTCTGATGTACTTATAAGTACACCTATTTTTACTGGTGATGGGGAAGGTGGAAGTGGTTTTGCCGCAGCTGCTGCTGCTGCAGCAGCAGGTGGCGTATCTGGATTTGAATTTGGTGTGGATCCAAACTTGGATCCTGAATTGGCTCTTGCTCTAAGAGTTTCAATGGAAGAGGAGAGAGCCAGACAGGAAGCAGCTGCAAAAAAGGCTGCAGAGGATGCTGCTAAACAGGAGAAAGGTGGTGAGCAGGCCGGCAGCTCGCAGGACGCAACAATGACTGAGCGTACCAGTGCAGCAGCTTCTGAAGCTGAGACTAAGACAAATGATACGATGGATGATGAGAATGCTCTACTACAGCAGGCCCTTGCTATGTCAATGGATGAGATTAGCCATGACACGAAAGATGCAGATATGTCTGAAGCAGCTGCAGATGATCCTGAGTTGGCTCTAGTTGCAGACAGTACCAAGGACTCAGGAAGCCAGTCAGACATGAGTAAATTGTTGGCAGATCAGTCCTTTGTATCTTCTATCCTTGCATCGCTTCCTGGGGTTGACCCAAATGACCCATCTGTCAAAGATTTGCTGGCCTCCATGCAAAATCAATCTGAGCCTCAGCAGAAGAATGAAGACAAGCCACCAAATGAGGAGGAGGAGGAGGAGAAGAAATAA 1206 0.4726 MVLEATMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPTSDLGKILACMHGLEIGGEMNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPIKHEKKMLEMIGRKLKKNSVALDIVNFGEEDEGKTEKLEALLAAVNNNDTSHMVHVPPGPNALSDVLISTPIFTGDGEGGSGFAAAAAAAAAGGVSGFEFGVDPNLDPELALALRVSMEEERARQEAAAKKAAEDAAKQEKGGEQAGSSQDATMTERTSAAASEAETKTNDTMDDENALLQQALAMSMDEISHDTKDADMSEAAADDPELALVADSTKDSGSQSDMSKLLADQSFVSSILASLPGVDPNDPSVKDLLASMQNQSEPQQKNEDKPPNEEEEEEKK* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03238 401 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 1 390 IPR027040 GO:0006511|GO:0008540
Rops2g03238 401 MobiDBLite consensus disorder prediction 387 401 - -
Rops2g03238 401 MobiDBLite consensus disorder prediction 242 258 - -
Rops2g03238 401 MobiDBLite consensus disorder prediction 358 401 - -
Rops2g03238 401 ProSiteProfiles VWFA domain profile. 5 189 IPR002035 -
Rops2g03238 401 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 292 311 IPR003903 -
Rops2g03238 401 Gene3D - 220 321 - -
Rops2g03238 401 MobiDBLite consensus disorder prediction 372 386 - -
Rops2g03238 401 Pfam Ubiquitin interaction motif 224 237 IPR003903 -
Rops2g03238 401 Pfam Ubiquitin interaction motif 292 307 IPR003903 -
Rops2g03238 401 SMART uim 292 311 IPR003903 -
Rops2g03238 401 SMART uim 222 241 IPR003903 -
Rops2g03238 401 MobiDBLite consensus disorder prediction 309 343 - -
Rops2g03238 401 MobiDBLite consensus disorder prediction 242 291 - -
Rops2g03238 401 Coils Coil 232 257 - -
Rops2g03238 401 Gene3D von Willebrand factor, type A domain 3 186 IPR036465 -
Rops2g03238 401 SMART VWA_4 2 175 IPR002035 -
Rops2g03238 401 Pfam von Willebrand factor type A domain 6 115 IPR002035 -
Rops2g03238 401 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 222 241 IPR003903 -
Rops2g03238 401 SUPERFAMILY vWA-like 4 175 IPR036465 -
Rops2g03238 401 CDD PSMD4_RAZUL 339 382 - -
Rops2g03238 401 CDD VWA_26S_proteasome_subunit 1 188 - -
Rops2g03238 401 MobiDBLite consensus disorder prediction 260 284 - -
Rops2g03238 401 FunFam 26S proteasome regulatory subunit N10 220 306 - -
Rops2g03238 401 FunFam 26S proteasome non-ATPase regulatory subunit 4 3 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03238 Rops-Chr2 59175571 59181832 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03238 K03029 - gmx:100814594 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03238 2 59175571 59181832 Rops2g03238 2 59175571 59181832 ECH