Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03237 ATGGGAAACTCAAGGGCTTTAGCTGCAGAGTTTCTCTCTGCTCTTCTCTCTCTTTGTTTCTATGGCGCACTAGTTTGTGCTAAATACATAAAGTATAATACTGGGGCTGGTATTGTTCAAGGAAAATTGAATGTTCATCTGGTTGCACATTCCCACGATGATGTTGGTTGGTTGAAGACCATTGATCAGTACTATGTTGGGTCAAACAATAGTATTCAGGGAGCGTGCGTTGAGAATGTGCTGGACTCGGTGGTTGTGTCCCTTCAGAAAGATCCAAATAGAAAGTTTGTGTTTGCTGAGATGGCGTTTTTCCATCGATGGTGGGTAGAACAAAGTCCAGAAACACAAGAACAAGTGAGAAAGCTTGTGGATGCAGGGCAATTAGAATTCGTAAATGGTGGATGGTGTATGCACGATGAAGCCACGTGTCACTACATAGACATGATTGACCAAACCACTTTGGGTCATCTTTTCATCAAGGAGCAATTTAATAAGACCCCTCGTGCTGGGTGGCAGATTGATCCTTTTGGACACTCTGCTGTGCAAGCTTATCTATTGGGAGCTGAGCTTGGCTTTGATTCTGTACACTTTGCCAGAATTGATTATCAGGACAGAGCTAAGCGCAAAGATGATAAGTCCCTTGAAGTTGTTTGGCGTGGGTCCAAAACATTTGGTTCTTCAGCTCAGATTTTTACCAATGCGTTTCCCAAACATTATAGTGCTCCAAAGGGTTTCAACTTTGAAGTCAGCAGTGACTTTGTTCCTGTGCAGGATGATCCTCTTCTTTTTGATTACAATGTTGAACTGCGAATCAAAGACTTTATTGATGCTGCTATTACCCAAGCAAATGTGACGAGGACAAATCACATCATGTGGACAATGGGTGATGATTTCCAGTACCAATATGCAGAGTCTTGGTTCAAACAAATGGATAAATTAATTCACTATGTTAACAAGGATGGTAGAGTAAATGCCATATATTCTACTCCATCTATTTACACTAATGCCAAAAATGCTGCAAATCAATCTTGGCCACTGAAAACTGATGACTACTTCCCGTATGCCGATGGACCAAATGCTTATTGGACAGGCTTTTTCACCAGTCGTGCAGCCTTAAAGCGATATGTTAGGATGCTAAGTGGGTACTATCTGGCAACACGCCAACTTGAAGTTTTTACTGGAAAGCAATCAACTATGTACCATACTTTTGACCTTGGAGATGCTCTAGGAGTTGCACAGCATCATGATGCTGTCACTGGCACTGCCAAACAACATACAACTGATGACTATGCCAAACGACTGGCTATTGGAGCCTCTAAGGCTGAAGCAGTTGTTAGTTCTTCATTGGCTTGTCTTACCAGTAAGAAATCAGGTGACCAATGTTCAGCATCTGCATCAGCATTTGCACAGTGTCAATTACTCAATATCAGTTACTGCCCTCCAACAGAAAATATTCCAGAAGCTAAGGGTTTGGTAGTAGTGGTGTATAACCCACTTGGATGGAGTCGTACTGATATTGTTAGAATACCAGTTAATGATGCTAATCTTGTTGTCAAAGATTCATCCAGCAATAAGCTTGAAGCACAATATGTGGATGTGGATGATGTTACAACAAATTTAAGAAAATTATATGTGAAGGCCTATTTGGGGAAGTCTCTAAAACAAGCCCCAAAATACTGGCTTCTGTTTCAGGTGTCAGTACCTCCACTTGGATGGAGTACATACTTCATTTCTGAAGCAGCTGGAAAAGGGACAAGGAGAACAGGAGATCTCTCACACCTCAGCAGACAGAAAGGTGAGAACTTTGACATAGGGCCGGGAAATTTAAAGATGTCCTTTTCTTCAACCTCTGGACAACTCAAACGGATGTATAATTCCAAAACTGGAGTTGATATACCAATTCAGCAAAGCTACCTCTGGTATGGTTCTAGCGAGGGCGATAGTGCCGATGATCAGGCTTCTGGTGCATATATATTCCGGCCCAGTGGGTCCTCTCCCAGTATTGTTTCTAGATCAGTGCCCTTGAAGGTAATTCATGGACCACTAGTTGACGAGGTTCATCAGAAGTTCAGTTCTTGGATTTACCAGGTTACTAGGCTTTACAAAGACAAAGACCATGCTGAAATCGAATTCACCATTGGTCCAATTCCAACTGATGATGGAGTTGGAAAAGAGGTGATCACACGAATGACAGCAAATATGGCCACAAACAAGGAGTTTTATACTGATTCTAGTGGAAGAGATTTTCTAAAACGGGTTCGAGATCATAGAGAAGATTGGCCCCTTCAAGTAACTCAACCTGTAGCAGGAAACTATTATCCACTTAACCTTGGAATTTATACTAAGGATAAGAAATCTGAATTCTCAGTCTTAGTTGATCGTGCCACTGGTGGAGCCAGCATCAAAGATGGCGAGGTGGAATTGATGCTTCATAGGCGTATTCTCCACGACGATGCTAGAGGAGTAGGGGAACCACTTGATGAACAAGTTTGCGTGAACAATAATAATACATGTGAAGGACTAACAGTCAGAGGAAATTATTATATTGGCATCCACAATGTTGGAGCTGGTTCACGCTGGCGCCGTACAACTGGTCAGGAAATTTACTCACCACTCTTATTGGCTTTTACACATGAGAACGTGGAAAGTTGGAAGTCCTCTCATTTGACCAAAGGAACTTTCATGGATCCAAATTACAGCTTGCCTCCTAATGTTGCTTTGATAACTCTCGAGGAGTTGGATGGTGGAGCTGTTCTTCTCCGTTTGGCACATCTATATGAGCCGAGTGAAGATGCTCAGTATTCAACTCTGACCAAAGTTGAGCTGAAAAAGTTGTTCGCCACAAAAACGATAAAGGAGTTGAAGGAGGTAAGTTTATCAGCTAACCAAGAGAAGTCAGAAATGAAGAAAATGACATGGAAGGTTGAAGGGGACACAGGAAAAGAACCTAAAGCAGTTAGGGGTGGCCCTGTCAGCACTCCTGGTTTTGTTGTTGAACTTGGTCCCATGGAAATACGTACTTTCCTGTTGAAATTTTAA 3039 0.4212 MGNSRALAAEFLSALLSLCFYGALVCAKYIKYNTGAGIVQGKLNVHLVAHSHDDVGWLKTIDQYYVGSNNSIQGACVENVLDSVVVSLQKDPNRKFVFAEMAFFHRWWVEQSPETQEQVRKLVDAGQLEFVNGGWCMHDEATCHYIDMIDQTTLGHLFIKEQFNKTPRAGWQIDPFGHSAVQAYLLGAELGFDSVHFARIDYQDRAKRKDDKSLEVVWRGSKTFGSSAQIFTNAFPKHYSAPKGFNFEVSSDFVPVQDDPLLFDYNVELRIKDFIDAAITQANVTRTNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNKDGRVNAIYSTPSIYTNAKNAANQSWPLKTDDYFPYADGPNAYWTGFFTSRAALKRYVRMLSGYYLATRQLEVFTGKQSTMYHTFDLGDALGVAQHHDAVTGTAKQHTTDDYAKRLAIGASKAEAVVSSSLACLTSKKSGDQCSASASAFAQCQLLNISYCPPTENIPEAKGLVVVVYNPLGWSRTDIVRIPVNDANLVVKDSSSNKLEAQYVDVDDVTTNLRKLYVKAYLGKSLKQAPKYWLLFQVSVPPLGWSTYFISEAAGKGTRRTGDLSHLSRQKGENFDIGPGNLKMSFSSTSGQLKRMYNSKTGVDIPIQQSYLWYGSSEGDSADDQASGAYIFRPSGSSPSIVSRSVPLKVIHGPLVDEVHQKFSSWIYQVTRLYKDKDHAEIEFTIGPIPTDDGVGKEVITRMTANMATNKEFYTDSSGRDFLKRVRDHREDWPLQVTQPVAGNYYPLNLGIYTKDKKSEFSVLVDRATGGASIKDGEVELMLHRRILHDDARGVGEPLDEQVCVNNNNTCEGLTVRGNYYIGIHNVGAGSRWRRTTGQEIYSPLLLAFTHENVESWKSSHLTKGTFMDPNYSLPPNVALITLEELDGGAVLLRLAHLYEPSEDAQYSTLTKVELKKLFATKTIKELKEVSLSANQEKSEMKKMTWKVEGDTGKEPKAVRGGPVSTPGFVVELGPMEIRTFLLKF* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03237 1012 CDD GH38N_AMII_LAM_like 43 319 - -
Rops2g03237 1012 FunFam Alpha-mannosidase 890 1012 - -
Rops2g03237 1012 Pfam Alpha mannosidase middle domain 360 452 IPR015341 GO:0004559|GO:0006013
Rops2g03237 1012 FunFam Alpha-mannosidase 470 580 - -
Rops2g03237 1012 Gene3D - 470 580 IPR013780 -
Rops2g03237 1012 SMART Alpha_mann_mid_2 360 434 IPR015341 GO:0004559|GO:0006013
Rops2g03237 1012 Pfam Glycosyl hydrolases family 38 C-terminal domain 605 820 IPR011682 GO:0004559|GO:0006013
Rops2g03237 1012 PANTHER ALPHA-MANNOSIDASE 17 1012 - -
Rops2g03237 1012 FunFam Alpha-mannosidase 403 458 - -
Rops2g03237 1012 Gene3D - 891 1012 - -
Rops2g03237 1012 Gene3D Glycoside hydrolase 38, N terminal domain 43 323 IPR027291 -
Rops2g03237 1012 FunFam Alpha-mannosidase 322 402 - -
Rops2g03237 1012 Gene3D Glycoside hydrolase family 38, central domain 403 458 IPR037094 GO:0004559|GO:0006013
Rops2g03237 1012 Gene3D Glycoside hydrolase family 38, central domain 324 402 IPR037094 GO:0004559|GO:0006013
Rops2g03237 1012 SUPERFAMILY Glycoside hydrolase/deacetylase 32 358 IPR011330 GO:0005975
Rops2g03237 1012 Gene3D - 602 870 - -
Rops2g03237 1012 FunFam Alpha-mannosidase 43 323 - -
Rops2g03237 1012 SUPERFAMILY Galactose mutarotase-like 466 1012 IPR011013 GO:0003824|GO:0005975|GO:0030246
Rops2g03237 1012 FunFam Alpha-mannosidase 603 870 - -
Rops2g03237 1012 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 904 1009 IPR041147 -
Rops2g03237 1012 Pfam Glycosyl hydrolases family 38 N-terminal domain 44 355 IPR000602 GO:0004559|GO:0006013
Rops2g03237 1012 SUPERFAMILY Families 57/38 glycoside transferase middle domain 360 459 IPR028995 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03237 Rops-Chr2 59162758 59173084 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03237 25 959 Glycoside Hydrolase AT3G26720 60.150 0.0 1190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03237 K01191 - gmx:100775419 1794.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03237 2 59162758 59173084 Rops2g03237 2 59162758 59173084 ECH