Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03233 ATGTTGCAAGATATGTGGAATGCTCCCCCAGGTTTCAGACCCTCCAAGTCTGCACCTTCTTCTCCAGCAAAGCCTCTTGGGGTTCCCAGAACTCGGTCTGAATCTTTTCATGTCACCCACAAGGTCCCAGTTGGTGATACTCCTTATGTCAGAGCCAAAAATGTTCAGTTGGTGGAAAAGGACCCAGAGAGAGCAATTCCACTGTTTTGGGCAGCCATTAATGCGGGAGATAGAGTGGACAGTGCTTTGAAAGATATGGCTATTGTGATGAAGCAGCAGAACCGGGCTGAAGAAGCCATTGAAGCTATTAAATCACTTCGAAGTAGATGTTCAGATCAAGCCCAAGAATCTCTTGACAATATCCTCTTGGATCTTTACAAGAGGTGTGGGAGACTTGATGACCAAATTTCTCTCTTGAAGCGCAAGTTATACTTGATTCAACAAGGGTTGGCTTTCAATGGCAAGCGCACAAAAACTGCCAGATCTCAAGGGAAGAAGTTTCAAGTCTCTGTGGAACAAGAAGCCACTAGATTGCTGGGAAACTTGGGATGGGCACTGATGCAACAGAACAACTACATCGAAGCAGAAGAAGCTTATCGCCGGGCCCTTGCAATAGGTCCAGATAACAATAAGATGTGCAATTTGGGCATCTGCTTGATGAAGCAAGGAAGAATTGCTGAGGCCAAAGAAACTCTATATAGGGTAAAGCCTGCAGTTGTAGATGGCCCAAGAGGGTCAGATTCTCATCTGAAAGCCTATGAAAGGGCACAGCAAATGCTCAAAGATCTTGAATCTGAGATGATGAATAAGGGAGGGGATAGGATTGAACAAAGCAGGCTCTTTGAAGCTTTTCTGGGTTCTTCATCAATCTGGCAACCTCAGCCTTGTAAGGATCTCACAAGCTTCGTAGCAACAAATTCAGTCAGAACCCAGACCCAAGATGAATTTGGGGATGAGAACATCAATTCCAATATAATAACAACAAACCACACGGTAGCACCACAGCATAAAGGTAGCAAACATGTTGCAATATTGGGGAACTCACTTAATGTTGCAGCTCCACCATTTTATGCATCCAAATCTTTCAAGGAGCCTATGTTAAGAGAACCGAATGTGAATCACTTCTCGGAGACCCTTAAGAGAACAAGGTCTGGAAATGCTGCAGGCTCCATGAGAGTGAATGATGTAGGGGAGATCAACAAGTTGAATACGGAATTAGGAGGGGTCCCTGAGAACAAAACAAGAAGGCTTTCATTTGAGGATACTGATGAGAAGAACAGGTTGGCAGACTTTTTACCAGACAACAAAGACTTTGAAGATGCTATTCTTGCTGCAATTTTGGGGCCAGCAAATGAGTCAGATAAAGCCTCTGGGATTTTACAGAAGAAAAATGACAAGAGGCTTAAGGTTTTTCAAGATATTACATTATCTTTGAGTCCAAGAGCCTGA 1449 0.4375 MLQDMWNAPPGFRPSKSAPSSPAKPLGVPRTRSESFHVTHKVPVGDTPYVRAKNVQLVEKDPERAIPLFWAAINAGDRVDSALKDMAIVMKQQNRAEEAIEAIKSLRSRCSDQAQESLDNILLDLYKRCGRLDDQISLLKRKLYLIQQGLAFNGKRTKTARSQGKKFQVSVEQEATRLLGNLGWALMQQNNYIEAEEAYRRALAIGPDNNKMCNLGICLMKQGRIAEAKETLYRVKPAVVDGPRGSDSHLKAYERAQQMLKDLESEMMNKGGDRIEQSRLFEAFLGSSSIWQPQPCKDLTSFVATNSVRTQTQDEFGDENINSNIITTNHTVAPQHKGSKHVAILGNSLNVAAPPFYASKSFKEPMLREPNVNHFSETLKRTRSGNAAGSMRVNDVGEINKLNTELGGVPENKTRRLSFEDTDEKNRLADFLPDNKDFEDAILAAILGPANESDKASGILQKKNDKRLKVFQDITLSLSPRA* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03233 482 ProSiteProfiles TPR repeat profile. 176 209 IPR019734 GO:0005515
Rops2g03233 482 PANTHER PROTEIN POLLENLESS 3-LIKE 2 15 476 IPR044961 -
Rops2g03233 482 Gene3D Tetratricopeptide repeat domain 54 237 IPR011990 GO:0005515
Rops2g03233 482 SUPERFAMILY TPR-like 56 283 IPR011990 GO:0005515
Rops2g03233 482 Coils Coil 246 273 - -
Rops2g03233 482 Pfam Tetratricopeptide repeat 178 209 IPR001440 GO:0005515
Rops2g03233 482 Coils Coil 89 116 - -
Rops2g03233 482 SMART tpr_5 176 209 IPR019734 GO:0005515
Rops2g03233 482 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03233 Rops-Chr2 59091589 59093611 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03233 - - adu:107476429 747.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03233 2 59091589 59093611 Rops2g03233 2 59091589 59093611 ECH