Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03231 ATGGCGAAGCGAAACTACGTCGTTTTACTGTCATCGGAGGACGAGGATGGTGGTTCCAATACCCGTTCATTGAGTTCAAGCCGCAGCAATACAAAGCCCAATTCGAGGCCCACAGGCTCACGAGGAGGAAAGAAGAGGGCCCGAGTTTCGGGTTCTCGGCATCAACTCTCTAAACTCCATGAGATAAACTTATTTGAAGATGACTTCAATGAAGTTTTTACTGGGTCAAAGGTATCCGCTGGTACTCGAAGGAGCAATGCAACAGAGCTATGGGTTGATAAATACAAGCCTCGTTTATTGGAAGAGCTTTCTGTTCACAAGAAGAAGGTTGAAGAAGTTAAGACGTGGTTCGAGGAAAGGTTGAAACCTCCAAAGGATGTCTACAGAAATAATGTTCTTGTCATCAGTGGGCAGGCAGGAGTTGGAAAATCTGCTGCTATTCATGTAATTGCTTCTCATCTGGGAGCAGTTGTGTGTGGGTGGAACACACCTACACCTGTAATTTGGCAAGAACATCTTTATAACTCTGGCATAGGCACAAAATACACATCCAAGTTGGACGAATTTGAAACTTTTGTAGAGAGAATTAGGAAATATGGATTAATGCCAAGTTCCTTTACTGGGGAGTCAAAGCCTTCCACCATACTTTTAATAGATGATCTTCCCATGATGAATGGGAAAGCTGCTTTTGGAAGACTTAAAGATTGCTTGCACCTTTTGGTGCACTCAACTCAGATACCCACTGCAATATTGGTCACAGATTATGGAAATGCTGATTCAGCAGATTATAATGCACGGTGCCTGGAAGAACTTAAGATATCTCTAGAGAGTTCTGGGGCTTGTAAGGTTGCATTCAATCCGATTACAACGAATTCTATTAAGAAAATACTTTCTAGAATTTGTCAAATGGAGCAGTGTGATGTGACTTCTGAGTATGTTGATCTAATAGCAAAAGCAAGTGGAGGTGACATCAGACATGCAATTACTTCTTTACAGTTTTTCTGTCTAAAACCGAATCGAATCCATTCTTTGTCTCTATCTACTCACTCTCCTGGTGCATTAAAAGAGGAAAGTAATAAACCTGTTGGATTAGATGATGGATTTCCCTTGAACTTTGGCAGAGATGAGACACTATCTTTATTTCATGCCTTGGGGAAATTTTTGCACAATAAAAGGGAGACTGGAGGTGCAATAGAATATGACCATGATGGCTTTCGTATACATGAAAGATTTTCAAGATTACCATTAAAAATGGATGTCCCAGAGAAGATTCTTGGTCAAGCCCATGTGCAACCTGGTCCAGTTGCTGATTTTCTGCATGAAAATGTTCTAGATTTTTTGAATGATGAAGCCATAGATGATGCGTGGATTTTGTCTTCATATCTAGGTGATGCTGACATTCTTCTTGCTAAACTTTGGGGCTTGCCATCTAGTTATAACGAGGCAGAGAGTGTTTTACAGTCAGCTGCTGCATCCATTGCTGTTCGTGGGGTGTTATTTGGAAATTCTCATCCACTTTCCTCCAGATGGCATGCAATTCGTCGACCAAAGCTCTGGCAGGTGGAGAAAGCATCATTGTACAACAAAAATGAAATGTTTAGGCAGAGAATCCCTGCTTGTAAACAGTCGAGTTCTTATCATATGTCAATCATGGCCACAGAATACAGACCTATGTTTAACTTGCTTGGAAATAGGGCATGTGGTGGATATCATGAACTACATCAGGAATCAGTGCAGAACTTGGAAATGGAAGATTTTGATTTTGACAAAATGAGTTTGGATGACCAAGCAAGTGAGAGTTCCGATGATGACATAGAAGATTGGTAG 1827 0.4105 MAKRNYVVLLSSEDEDGGSNTRSLSSSRSNTKPNSRPTGSRGGKKRARVSGSRHQLSKLHEINLFEDDFNEVFTGSKVSAGTRRSNATELWVDKYKPRLLEELSVHKKKVEEVKTWFEERLKPPKDVYRNNVLVISGQAGVGKSAAIHVIASHLGAVVCGWNTPTPVIWQEHLYNSGIGTKYTSKLDEFETFVERIRKYGLMPSSFTGESKPSTILLIDDLPMMNGKAAFGRLKDCLHLLVHSTQIPTAILVTDYGNADSADYNARCLEELKISLESSGACKVAFNPITTNSIKKILSRICQMEQCDVTSEYVDLIAKASGGDIRHAITSLQFFCLKPNRIHSLSLSTHSPGALKEESNKPVGLDDGFPLNFGRDETLSLFHALGKFLHNKRETGGAIEYDHDGFRIHERFSRLPLKMDVPEKILGQAHVQPGPVADFLHENVLDFLNDEAIDDAWILSSYLGDADILLAKLWGLPSSYNEAESVLQSAAASIAVRGVLFGNSHPLSSRWHAIRRPKLWQVEKASLYNKNEMFRQRIPACKQSSSYHMSIMATEYRPMFNLLGNRACGGYHELHQESVQNLEMEDFDFDKMSLDDQASESSDDDIEDW* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03231 608 CDD HLD_clamp_RFC 288 341 - -
Rops2g03231 608 FunFam RAD17 checkpoint clamp loader component 88 269 - -
Rops2g03231 608 Gene3D - 290 348 - -
Rops2g03231 608 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 85 573 IPR004582 GO:0006281
Rops2g03231 608 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 339 IPR027417 -
Rops2g03231 608 MobiDBLite consensus disorder prediction 14 38 - -
Rops2g03231 608 MobiDBLite consensus disorder prediction 39 53 - -
Rops2g03231 608 Pfam Rad17 P-loop domain 86 262 - -
Rops2g03231 608 Gene3D - 88 270 IPR027417 -
Rops2g03231 608 MobiDBLite consensus disorder prediction 1 55 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03231 K06662 - gmx:100799826 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03231 2 59073497 59078810 Rops2g03231 2 59073497 59078810 ECH