Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02996 ATGGTAATCGTGGCATTATCTTCTTCCCTCCCTGGAAGGAGGAACCTCTTCTCCTCCTTACCTTCAACACCACCGCCCCACGTCCCCACCACCTCCACCGCCGCCACCCCTCCGCCACCAATCCCAATCCCAAAATACCCCCCACCCAGAAAATCCCAAAACCCAGACCTCAAATTCCCCCCACCACAAAACCCCCAAAACCCAGGCCTCAAATACCACCGCCACTCCAAGTACCACAAACCTGTGAAAGACGGCGGCGTCATCACATCCGACGGCGAACGCTCCGTAATTATTGGGGAATCCGGTGTGTCATATCTCCTCCCCGGCGCCCCCTTCGAGTTCCAGTTTAGTTATTCAGAGACTCCGAAGGAGAAGCCACTGGCAATTCGAGAGCCGGCGTTCCTTCCTTTCGCACCGCCGACAATGCCGAGGCCGTGGACCGGAAAGGCACCGTTGAAGAGCAAGAAGAAGAAGAAGATTCCACTGTTTGATTCGTTTAACCCTCCACCTCCAGACAAAAAGGGAGTGAAGCACGTTGAAATGCCAGGACCCTTTCCACTAGGGAAGTATCCAAAGGAAGGGAAAACTCGTGAAGAGATACTTGGAGAACCTCTTAAACGATGGGAGATAAAAATGCTTGTTCAGCCTATGTTATCTGATAATAGACAAGTTAATCTTGGAAGGGATGGATTAACGCATAACATGTTGGAGTTGATACATTCGCATTGGAAGCGTCGCAGAGTCTGTAAAGTTAAATGTAAAGGTGTTCCCACTGTAGATATGGATAATGTTTGCCGCCATATTGAGGAGAAAACAGGGGGGAAAATAATTCATCGAGTTGGTGGAGTAGTTTATCTTTTCCGTGGCAGAAATTACAACTATAGTACTCGTCCACAGTATCCAGTGATGCTTTGGAAACCAGCTGCTCCTGTTTACCCAAAACTTATACAAGATGCTCCAGGAGGACTAACGAAAGCTGAAGCTGATGAATTACGGAAGAAAGGGAGAAACCTGTTGCCAATATATAAATTAGCAAAAAATGGAGTATACATCTCCCTTGTAAAGGATGTCAGAGATGCTTTTGAAGGAAGTCCTTTGGTGAAGGTTGACTGCAAGGGATTGGATCCTAGTGATTACAAAAAAATAGGTGCCAAGCTTAAGGATTTGGTTCCTTGTGTGCTGTTGTCTTTCGATGATGGACAGATATTGATGTGGAGGGGCAAAGACTGGAAACCAAGGTACCCACAAGCTCCTCCAATTTTTACTCCTATTGAAGCCGGCATTACAAAGAATTTGGACGATACAGGTGAGGCTGATAATAATCAATCGAAGCATGAAGGCAACATGTTGTCTCTGTGCACAAGCCCAAAAATGTTGTCTCTGTGGAAGAGTGCAATAGAGTCAAACAAAGCTTTGTTGCTGGAAGAATGTAAACTGGGTCCTGATGCTCTCTTGGAGAAGGTAGAGGAATTTGAGGGTATTTCACATGCCATGGAGCACTCTTATCCAGCATTTGCTTTGTCAAGTGAAGATGATGCTGAAGGTTCAATTGAAAACTTTGAAGATGAAGAGGATGATGATGCAGAAGACAGCTATTCAAGTGACAACTTACCTAGTGAGGAGGAGGAGGTGGAGGATGATTATTACGATGATGATGATGACGACGACGATGACGACTACCATGATGATGAAGATGATGACTTGGATATAGTGGACACATCAGCTCAACCCGGATCATTACCTGTTGATATGATTGCCAAAAAGCTGAAACCAAGATATTAG 1782 0.4574 MVIVALSSSLPGRRNLFSSLPSTPPPHVPTTSTAATPPPPIPIPKYPPPRKSQNPDLKFPPPQNPQNPGLKYHRHSKYHKPVKDGGVITSDGERSVIIGESGVSYLLPGAPFEFQFSYSETPKEKPLAIREPAFLPFAPPTMPRPWTGKAPLKSKKKKKIPLFDSFNPPPPDKKGVKHVEMPGPFPLGKYPKEGKTREEILGEPLKRWEIKMLVQPMLSDNRQVNLGRDGLTHNMLELIHSHWKRRRVCKVKCKGVPTVDMDNVCRHIEEKTGGKIIHRVGGVVYLFRGRNYNYSTRPQYPVMLWKPAAPVYPKLIQDAPGGLTKAEADELRKKGRNLLPIYKLAKNGVYISLVKDVRDAFEGSPLVKVDCKGLDPSDYKKIGAKLKDLVPCVLLSFDDGQILMWRGKDWKPRYPQAPPIFTPIEAGITKNLDDTGEADNNQSKHEGNMLSLCTSPKMLSLWKSAIESNKALLLEECKLGPDALLEKVEEFEGISHAMEHSYPAFALSSEDDAEGSIENFEDEEDDDAEDSYSSDNLPSEEEEVEDDYYDDDDDDDDDDYHDDEDDDLDIVDTSAQPGSLPVDMIAKKLKPRY* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02996 593 Gene3D - 204 300 IPR035920 -
Rops2g02996 593 Gene3D - 323 417 IPR035920 -
Rops2g02996 593 ProSiteProfiles CRM domain profile. 203 299 IPR001890 GO:0003723
Rops2g02996 593 SUPERFAMILY YhbY-like 323 414 IPR035920 -
Rops2g02996 593 MobiDBLite consensus disorder prediction 22 67 - -
Rops2g02996 593 FunFam CRS2-associated factor 1, chloroplastic 204 299 - -
Rops2g02996 593 MobiDBLite consensus disorder prediction 521 571 - -
Rops2g02996 593 Pfam CRS1 / YhbY (CRM) domain 323 406 IPR001890 GO:0003723
Rops2g02996 593 Pfam CRS1 / YhbY (CRM) domain 209 288 IPR001890 GO:0003723
Rops2g02996 593 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 51 589 IPR044599 GO:0000373
Rops2g02996 593 MobiDBLite consensus disorder prediction 13 87 - -
Rops2g02996 593 MobiDBLite consensus disorder prediction 521 593 - -
Rops2g02996 593 SUPERFAMILY YhbY-like 204 297 IPR035920 -
Rops2g02996 593 FunFam CRS2-associated factor 1, chloroplastic 322 417 - -
Rops2g02996 593 ProSiteProfiles CRM domain profile. 321 417 IPR001890 GO:0003723
Rops2g02996 593 SMART CRS1_YhbY_2 205 288 IPR001890 GO:0003723
Rops2g02996 593 SMART CRS1_YhbY_2 323 406 IPR001890 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02996 Rops-Chr2 53246641 53251698 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02996 - - gmx:100801953 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g02996 2 53246641 53251698 Rops2g02996 2 53246641 53251698 ECH