Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02942 ATGAAGTTTATGAAACTGGGATCTCGTCCAGATACCTTCTACACTGCAGAGTCAGTAAGGGCAGTCTCTTCTGAAGTTTCAAGCGACCTCATAATTCAAGTGAAAGGAAGTAGATATCTTCTTCACAAGTTTCCCCTGCTATCCAAGTGTTTGCGCCTGCAAAGGTTATGCTCAGAGTGTACTGATTCTCCACAGCATCAAATTGTTCAACTCCCTGATTTTCCTGGTGGGGTGGAAGCATTTGAACTGTGTGCTAAGTTCTGCTATGGTATTACCATCATTCTCAGTGCTTACAACATTGTAGCTGCACGATGTGCTGCAGAATACTTGCAGATGACAGAGGATGTTGAGAAGGGAAACTTAATTTATAAGCTTGAGGTTTTCTTCAATTCTTGCATCCTTCATGGCTGGAAGGATTCTATTGTGACTCTACAAACCACCAAAGCATTGGCTTTGTGGTCAGAGGACTTGGCAATTACCACCAGATGCATTGAAGCTATTGCCTCAAAGGTCTTAAGCAACCCCTCAAAGGTGAGTTTGTCACATAGTCATTCCAGAAGGGTCAGGGATGATGTATCTTGCAATGGAACCGAAAGTCTAAGACATAAATCAACAAGCAAGGGTTGGTGGGCTGAAGATTTAGCAGAACTAAGCATAGACCTCTATTGGAGAACAATGATAGCTATCAAATCTGGTGGCAAGATAGCCTCAAATCTCATTGGTGATGCATTAAAAATTTATGCATCTCGATGGTTACCAAATATCCCAAAAAATGGGCATGTCAAGAAGGAAGCTGGACCTGAGTCTGATTCAGATTCAGCAAATGAAATAACTTCAAAGCACCGTCTACTTTTGGAATCAATAGTAAGCTTGCTTCCATCAGAGAAAGGTGCTGTTTCTTGTAGCTTCCTTCTTAAACTCTTGAAGGCAGCCAATATTCTTAATGCTTCTTCTTCTTCAAAGATGGAATTAACTAGAAGAATAGGACTTCAATTGGAGGAAGCCACAGTGAATGATCTTTTAATACCCTCACTATCTTCCACAAATGATATGCTGTATGAAGTGGACTTGGTGATGACCATATTGGAACAATTTATGTTACAAGGGAAGAGTCCACCAACCAGCCCTCCAAGATCCAGGTTTGCCTTTGAAAGAAGGAGATCTCGTTCAGCTGAGAATATTAACTTTGAATTACAGGAGAGTAGGAGGTCTTCTTCAGCATCTCATAGCTCTAAACTGAAGGTGGCAAAGCTTGTGGATAGGTATCTTCAAGAGGTTGCCAAGGATGTGTATTTGCCTCTATCGAAATTCATTGCTCTTGCTGAAACTATCCCAGAATTTACAAGACATTATCATGATGATCTCTACAGAGCTATTGACACTTATCTCAAGGTTCATCCAGAACTCAACAAGAGTGAAAGGAAAAGACTATGTCGAATTCTAGACTGCAAAAAACTGTCTATGGAAGTATGCATGCATGCTGCACAGAATGAGCTACTTCCCCTGAGGGTGGTTGTCCAAGTTCTCTTCTTTGAGCAAGCTCGAGCTGCAACAACTGGTGGCAAAGTGACTCACATGGCAAGCAACATCAAGGCATTACTCACTGCTCATGGCATTGACCAATCAAAACATATTGAACCATTAAGCACTACTACAAGTGTACATGCGGATGATAATTGGAGTGTTTCTGGATTCAAGTCACCAAAGTCAACAAGGAACCCAACTCTCAGGATGAAGCTAGCTGAGGATGACTTAAATCGAAATAATGTGCCCCAAGATGGAATTGGGAGAACTTCTAGATTTAAGGGTCTTCGTGGTCTTCCTACTCAGCCCAAAAGAATGCTTAGTAAGTTGTGGTCTACCAACAGAAGTGCCACTGAAAATAATTGA 1890 0.4143 MKFMKLGSRPDTFYTAESVRAVSSEVSSDLIIQVKGSRYLLHKFPLLSKCLRLQRLCSECTDSPQHQIVQLPDFPGGVEAFELCAKFCYGITIILSAYNIVAARCAAEYLQMTEDVEKGNLIYKLEVFFNSCILHGWKDSIVTLQTTKALALWSEDLAITTRCIEAIASKVLSNPSKVSLSHSHSRRVRDDVSCNGTESLRHKSTSKGWWAEDLAELSIDLYWRTMIAIKSGGKIASNLIGDALKIYASRWLPNIPKNGHVKKEAGPESDSDSANEITSKHRLLLESIVSLLPSEKGAVSCSFLLKLLKAANILNASSSSKMELTRRIGLQLEEATVNDLLIPSLSSTNDMLYEVDLVMTILEQFMLQGKSPPTSPPRSRFAFERRRSRSAENINFELQESRRSSSASHSSKLKVAKLVDRYLQEVAKDVYLPLSKFIALAETIPEFTRHYHDDLYRAIDTYLKVHPELNKSERKRLCRILDCKKLSMEVCMHAAQNELLPLRVVVQVLFFEQARAATTGGKVTHMASNIKALLTAHGIDQSKHIEPLSTTTSVHADDNWSVSGFKSPKSTRNPTLRMKLAEDDLNRNNVPQDGIGRTSRFKGLRGLPTQPKRMLSKLWSTNRSATENN* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02942 629 SUPERFAMILY POZ domain 21 115 IPR011333 -
Rops2g02942 629 Gene3D Potassium Channel Kv1.1; Chain A 19 126 IPR011333 -
Rops2g02942 629 PANTHER OS12G0117600 PROTEIN 23 550 IPR043454 -
Rops2g02942 629 MobiDBLite consensus disorder prediction 584 608 - -
Rops2g02942 629 Pfam NPH3 family 209 491 IPR027356 -
Rops2g02942 629 ProSiteProfiles NPH3 domain profile. 208 515 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02942 Rops-Chr2 52066022 52069363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02942 26 539 EF-hand Containing Proteins AT3G44820 35.240 1.31e-92 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02942 - - gmx:100792829 996.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g02942 2 52066022 52069363 Rops2g02942 2 52066022 52069363 ECH