Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02721 ATGCCAGCTAAGTCACTCCTGTCAGATTTGGTCCTTTTCACTGATAAAGCAACTGTGGTTTCTTCACACACAAGGCCTTTTACAACTCCAAGTGTCACACGCTTGACGGATTCTTTTCCTCGTGTCCCAGTTGATCGTGCTTTTTCTACGGCTTTTGGGGCCTCAAATGTCAAGTTTCTCAGTAATGGGTCCATGGCCACTCTGGCTCTTGACAAAATCTCAGGCTCTGGCCTGGTCTCCCAAAGCAGATACTACTATGGATTCTTCAGTGCTGCAATCAAATTACCAGCTGGTTTGTCATCTGGAGTTGTAGTTGCCTTTTATTTGTCAAATGCAGACAAATTCCCTCACAACCATGATGAGATAGATATTGAACTGCTTGGTCATGACAAGAGAAATGACTGGGTTATTCAAACAAATATCTATGCCAATGGAAGTGTCAGCACAGGAAGAGAAGAGAAATTCTATTTCTGGTTCGACCCAACACAGCAGTACCATTATTATAGCATCTTATGGAACAGTCATCACACAGTGTTTTTAGTGGACAATATTCCAGTGAGGGAATTCATACACAGCAGCACATTTTATCCATCAAAGCCAATGTCAGTGTATGCCACAATATGGGATGGATCAGAATGGGCTACTCATGGAGGAAAATACCCAGTTAACTACAAGTATGCACCATTTGTTGTTTCATTTGCAGAAATGGAATTGAGTGGATGCATTTCTGATCCCACAGCAGCAGTTTCTTCATGTTCTAAGGCCAATCCTTCAGGCCTAGACCCTGTTAATGGACCAGAGTTTACTAAGCTATCACAGCAGCAGATAACAGCCATGGACTGGGCAAGAAGGAAACTCATGTTTTACTCCTACTGCAATGACAGAGGCAGATTCAAAGTCTTACCATCAGAATGCCACTAA 921 0.4267 MPAKSLLSDLVLFTDKATVVSSHTRPFTTPSVTRLTDSFPRVPVDRAFSTAFGASNVKFLSNGSMATLALDKISGSGLVSQSRYYYGFFSAAIKLPAGLSSGVVVAFYLSNADKFPHNHDEIDIELLGHDKRNDWVIQTNIYANGSVSTGREEKFYFWFDPTQQYHYYSILWNSHHTVFLVDNIPVREFIHSSTFYPSKPMSVYATIWDGSEWATHGGKYPVNYKYAPFVVSFAEMELSGCISDPTAAVSSCSKANPSGLDPVNGPEFTKLSQQQITAMDWARRKLMFYSYCNDRGRFKVLPSECH* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02721 306 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 269 305 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Rops2g02721 306 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 37 233 IPR000757 GO:0004553|GO:0005975
Rops2g02721 306 CDD GH16_XET 45 305 IPR016455 GO:0010411|GO:0016762|GO:0042546
Rops2g02721 306 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 44 305 IPR044791 GO:0004553
Rops2g02721 306 Gene3D - 28 305 - -
Rops2g02721 306 SUPERFAMILY Concanavalin A-like lectins/glucanases 48 305 IPR013320 -
Rops2g02721 306 PIRSF EndGlu_transf 10 306 IPR016455 GO:0010411|GO:0016762|GO:0042546
Rops2g02721 306 Pfam Glycosyl hydrolases family 16 47 225 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02721 Rops-Chr2 46032362 46036187 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02721 18 306 Glycoside Hydrolase AT1G10550 65.203 8.18e-147 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02721 K08235 - gmx:100778993 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g02721 2 46032362 46036187 Rops2g02721 2 46032362 46036187 ECH