Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01898 ATGGATTATCAGTATATTCTGGGAGGGATTCTGGCTGGCAGTTTGGCGGTTGTGTTTGTTCTGTACAGTTTTCCAGAAAAGAGGAAGGCCACAGGTTCAAGTTCAATAAATGTAAAATGTAATGGGAGTGCAAAGACTTCAGAAAATGGAATATGCTCACAAGAGGATGCAAGAAATACGGACATCATCATTGTTGGTGCTGGGGTTGCTGGTGCAGCCCTTGCTTACACACTTGGAAAGGATGGACGGAAAGTGTATGTGATTGAAAGGGACTTGAGTGAACCTGACAGGATTGTGGGTGAACTGCTTCAACCTGGTGGCTATCTCAAGTTAATTGAGTTGGGTCTTGAGGATTGTGTGGATGAAATTGATTCTCAGAGAGTCTTTGGTTATGCTCTTTATAAGGATGGAAAAAATACCAAGCTGTCTTATCCCTTGGAAAATTTTGACTCTGATGTTTCCGGGAGAAGCTTTCACAATGGCCGCTTCATACAGAGAATGCGAGAAAAGGCTTCATCTCTTCCAAATGTTAAATTAGAACAAGGAACTGTCACATCTCTACTTGAAGAAAATGGAACCATCACAGGGGTGCACTACAAAACCAAGAGCGGACAAGAGTTAACAGCAAAGGCTCCCCTTACCATAGTTTGTGATGGTTGTTTTTCCAACTTGAGGCGTTCTCTTTGCAACCCTAAGGTTGAAGTACCCTCTCATTTTGTTGGTCTGCACTGA 732 0.4276 MDYQYILGGILAGSLAVVFVLYSFPEKRKATGSSSINVKCNGSAKTSENGICSQEDARNTDIIIVGAGVAGAALAYTLGKDGRKVYVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVDEIDSQRVFGYALYKDGKNTKLSYPLENFDSDVSGRSFHNGRFIQRMREKASSLPNVKLEQGTVTSLLEENGTITGVHYKTKSGQELTAKAPLTIVCDGCFSNLRRSLCNPKVEVPSHFVGLH* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01898 243 SUPERFAMILY FAD/NAD(P)-binding domain 59 229 IPR036188 -
Rops2g01898 243 Gene3D - 56 240 IPR036188 -
Rops2g01898 243 PANTHER SQUALENE MONOOXYGENASE 15 242 IPR040125 GO:0004506|GO:0016126
Rops2g01898 243 Pfam FAD binding domain 60 228 IPR002938 GO:0071949
Rops2g01898 243 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 61 83 - -
Rops2g01898 243 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 210 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01898 Rops-Chr2 29860089 29862345 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01898 43 242 Miscellaneous Gene Families AT1G58440 76.500 1.31e-106 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01898 K00511 - gmx:100800329 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01898 2 29860089 29862345 Rops2g01898 2 29860089 29862345 ECH