Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01854 ATGGCTTCTTTGTGGTTTCTCAAACTGGCTCTCAAATGTTTTGATCATTTAGCATGGCCTCTTCTTGCTCTGGGGTATCCTATGTATGCTTCAGTGCAAGCAATCGAGACTGATTCCTATACAGAAACTAGGAATTTGATCTCATATTGGATCCTTCTCTCATTAATATACCTCTTTGAGTATGCTTTTATGAGGCTTCTTCAATGGTTCCAGTTCTGGCCTTACATTAAGCTAGTGATCATCTTCTGGCTCATCATACCAGACTTTGGACGAGCTTCATATGTCTACAATAACCTTATTTGCTCCTGCATCTCCATGAAACCACAGACAGTCATATTCAGGTTAAATAACTGGAAGAAGTTTTCTGTCAAGAAAGAAAACTTCTTACAGCAAGCAGAGAGATATGTAAAAGAGAATGGAACTGAATCCTTGGAGAAACTCATTGCCAGTAAGAACACAACTTATAAACCTGATACAAAAGCAACAACTGCAATTAGAGCTACTGATAATAAAGAAATGAAACAGACAGATGGTAATAGGCTCCAAACAGAGCACAAAGACATCAAAGATTTGGAGGTTATTGAGAAAAAAGAAATTCCTACGGCCAAGCAAGATATCCCTGTCATGCCTAACCTTGAGCCAAGTCAAAACACTTTTTCAGCCACTGTGGAAACTAAAGGAATTGCAGGGAAAGACACAGCTGGTGGAGAGCTTCCTCAGAGTTCTACTCATAAGGAAGTGCAGAAAGAGTGGACTTGTGCTTTATGTCAGGTAAAAACTACTAGCGAGAAAACCTTGAATTGCCACCTGCATGGGGGGAAACACAGGGCTGCTTATGAAGCTTTGAAAGCAAAGAATCAACCTACTCCACAGAAGCTGAAAATCAATCCGTCCAAAGAGGAATTGAAACAGAAGAACATTAACAATCAGCTAAATTCCACTACCAAGAATGGAAAGAGTATTGTTAACAACGGGTTGAAGGGAATAGGAGTCATGGATCATAAGAAGGTGCAAGAACCGAAAAAGAACCAGTCTAAACCTGTTAGGATGAATAATTCCAAATTAAAATGTGAAGTATGTAATATTATCGTTCCTGGTGAGGTTGACATGGCCTCTCACTTAAAAGGGAGGAAGCACTTGGCTAAAATTTCAATTTTGATAGTGTAA 1167 0.3925 MASLWFLKLALKCFDHLAWPLLALGYPMYASVQAIETDSYTETRNLISYWILLSLIYLFEYAFMRLLQWFQFWPYIKLVIIFWLIIPDFGRASYVYNNLICSCISMKPQTVIFRLNNWKKFSVKKENFLQQAERYVKENGTESLEKLIASKNTTYKPDTKATTAIRATDNKEMKQTDGNRLQTEHKDIKDLEVIEKKEIPTAKQDIPVMPNLEPSQNTFSATVETKGIAGKDTAGGELPQSSTHKEVQKEWTCALCQVKTTSEKTLNCHLHGGKHRAAYEALKAKNQPTPQKLKINPSKEELKQKNINNQLNSTTKNGKSIVNNGLKGIGVMDHKKVQEPKKNQSKPVRMNNSKLKCEVCNIIVPGEVDMASHLKGRKHLAKISILIV* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01854 388 SMART ZnF_U1_5 248 282 IPR003604 GO:0003676|GO:0008270
Rops2g01854 388 SMART ZnF_U1_5 352 386 IPR003604 GO:0003676|GO:0008270
Rops2g01854 388 Pfam Zinc-finger of C2H2 type 251 275 - -
Rops2g01854 388 Pfam Zinc-finger of C2H2 type 356 379 - -
Rops2g01854 388 Gene3D Classic Zinc Finger 332 384 - -
Rops2g01854 388 Gene3D Classic Zinc Finger 236 281 - -
Rops2g01854 388 Pfam TB2/DP1, HVA22 family 27 101 IPR004345 -
Rops2g01854 388 SUPERFAMILY beta-beta-alpha zinc fingers 333 386 IPR036236 -
Rops2g01854 388 SUPERFAMILY beta-beta-alpha zinc fingers 241 288 IPR036236 -
Rops2g01854 388 PANTHER HVA22-LIKE PROTEINS 20 139 IPR004345 -
Rops2g01854 388 SMART c2h2final6 355 379 IPR013087 -
Rops2g01854 388 SMART c2h2final6 251 275 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01854 Rops-Chr2 28969049 28972412 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01854 - - gmx:100812073 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01854 2 28969049 28972412 Rops2g01854 2 28969049 28972412 ECH