Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01798 ATGGCTTCTTCTCTCAATCTCTCCACACCTCATTTCTCCCGCCCTCGACATTTCAAATTGTTCGATGGATTGCATAGTATCAATTCATCTATCTTTAATGCACGTGGGTCGGATTGGGCACTTGTCCAGCTGAACTCTAAATTTGCCTTAAGTCACAATGCTGTCAATAGAATTAAAGCTACATTGACCTCTGGAGGAGGAGACATAATTGGTGTTGGATCAGTTGGAACTGAGGGCCAACCTGATGCAATAGCATTAGGAACACTGGGAGCAGATACAGCACTAACAGACAATGGTTTTGCTGTTAACAATGATGATTTGGACAGTCCAACAGAAGGTTTTGCTTCCATACCAGAGGCCATCCAAGACATTCAGAATGGAAAGATGGTGGTGGTTGTAGATGATGAGGACAGAGAAAATGAAGGAGACTTAATAATGGCAGCACAGTTGGCAACACCTGAGGCTATGGCTTTTATTGTTAAATATGGAACTGGGATAGTTTGTGTAAGCATGAAAGAGGAAGATCTGGAGAGATTGGAACTTCCTTTGATGGTAAACAGTCGGGCTAATGATGAGAAACTTCGTACAGCTTTCACTGTGACTGTGGATGCTAAACATGGTACAACCACAGGGGTGTCAGCTCATGATAGGGCAACAACAGTTTTGGCCCTTGCATCAAGAGATTCATTGCCAAGTGATTTCAACCGCCCAGGCCATATTTTCCCACTAAAATACAGTGAAGGTGGTGTCTTGAAGAGAGCTGGACATACAGAAGCTTCAGTTGATCTTGCCATACTTGCTGGTTTGAATCCCGCGGCAGTTCTGTGTGAGATTGTGGATGATGATGGTTCCATGGCTAGATTACCTAAGCTTCGCCAGTTTGCAGAGCGTGAAAATTTGAAAATTATATCTATTGCTGACTTAATAAGGTATAGAAGGAAGAGAGATAAACTAGTAGAACGTGCTGGTGCTGCACTCATTCCAACAATGTGGGGACCATTCAAGGCTAATTGTTATAGGTCTCTTTTAGATGGGATTGAGCACATTGCAATGGTGAAGGGTGACATTGGAAATGGAGAGGATGTTCTTGTGAGAGTACACTCAGAGTGTCTTACAGGAGACATATTTGGATCTGCCAGATGTGACTGTGGAAATCAGCTTGCCTTAGCAATGCAACAGATTGAGGCTGCTGGTAGAGGTGTCTTGGTATATCTTCGTGGACATGAAGGAAGGGGTATTGGATTGGGCCACAAGCTTCGTGCTTATAACCTACAGGATAAGGGCCGGGATACCGTTGAAGCCAATGAGGAGTTGGGTTTGCCTGTTGACTCAAGGGAGTATGGAATTGGTGCACAGATATTGAGGGACTTGGGTGTTCGTTCTATGAAGCTGATGACAAACAACCCTGCAAAATATGTTGGGCTCAAAGGGTATGGTTTGACAATTTCTGGGAGGATCCCATTGCTATCACTCATCACAAAAGAAAACAAGAGGTACTTGGAGACCAAGCGTGTGAAAATGGGCCACATATATGGCTTGGAATTCAACACCAATTTGAACTATGATGAGAGTGGCAATGGTAAAGCCAGTAATGTTGATGATTCTAATGCTACTCCTGGCTTATAA 1626 0.436 MASSLNLSTPHFSRPRHFKLFDGLHSINSSIFNARGSDWALVQLNSKFALSHNAVNRIKATLTSGGGDIIGVGSVGTEGQPDAIALGTLGADTALTDNGFAVNNDDLDSPTEGFASIPEAIQDIQNGKMVVVVDDEDRENEGDLIMAAQLATPEAMAFIVKYGTGIVCVSMKEEDLERLELPLMVNSRANDEKLRTAFTVTVDAKHGTTTGVSAHDRATTVLALASRDSLPSDFNRPGHIFPLKYSEGGVLKRAGHTEASVDLAILAGLNPAAVLCEIVDDDGSMARLPKLRQFAERENLKIISIADLIRYRRKRDKLVERAGAALIPTMWGPFKANCYRSLLDGIEHIAMVKGDIGNGEDVLVRVHSECLTGDIFGSARCDCGNQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDKGRDTVEANEELGLPVDSREYGIGAQILRDLGVRSMKLMTNNPAKYVGLKGYGLTISGRIPLLSLITKENKRYLETKRVKMGHIYGLEFNTNLNYDESGNGKASNVDDSNATPGL* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01798 541 SUPERFAMILY RibA-like 317 488 IPR036144 -
Rops2g01798 541 Hamap Riboflavin biosynthesis protein RibBA [ribBA]. 113 509 IPR016299 GO:0009231
Rops2g01798 541 Hamap 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 112 316 IPR000422 GO:0008686|GO:0009231
Rops2g01798 541 SUPERFAMILY YrdC/RibB 113 315 IPR017945 -
Rops2g01798 541 CDD GTP_cyclohydro2 318 510 IPR000926 GO:0003935|GO:0009231
Rops2g01798 541 NCBIfam GTP cyclohydrolase II 324 510 IPR000926 GO:0003935|GO:0009231
Rops2g01798 541 FunFam Bifunctional riboflavin biosynthesis protein RIBA 1 chloroplastic 105 318 - -
Rops2g01798 541 Pfam GTP cyclohydrolase II 324 487 IPR032677 -
Rops2g01798 541 FunFam Riboflavin biosynthesis protein RibBA 319 490 - -
Rops2g01798 541 Hamap GTP cyclohydrolase-2 [ribA]. 317 513 IPR000926 GO:0003935|GO:0009231
Rops2g01798 541 Gene3D DHBP synthase 100 318 - -
Rops2g01798 541 PANTHER GTP CYCLOHYDROLASE II-RELATED 112 512 - -
Rops2g01798 541 Pfam 3,4-dihydroxy-2-butanone 4-phosphate synthase 119 311 IPR000422 GO:0008686|GO:0009231
Rops2g01798 541 Gene3D GTP cyclohydrolase II 319 489 IPR036144 -
Rops2g01798 541 NCBIfam 3,4-dihydroxy-2-butanone-4-phosphate synthase 115 312 IPR000422 GO:0008686|GO:0009231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01798 Rops-Chr2 27745973 27749682 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01798 K14652 - gmx:100791378 875.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01798 2 27745973 27749682 Rops2g01798 2 27745973 27749682 ECH
Rops2g01798 2 27745973 27749682 Rops11g00297 11 4008026 4013156 PCT