Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01361 ATGACCGGAACTGGAAGAAGAACCGCTCGGAGTAGAGTCCGATCCTCCTCCGAAGCCGACGCCGATTCTTTCCGAGAAAGGAGGCCAAAGTTGAACCGCCACAGAAGCAAATACGGAAGCTCCATTCCGTTATTTGATAATTTCAATCTCAAAGTGGTGCTCGGTATCAGCTTCTTGGCTTTCTTCATCATCTTGTTTCTGATCCGTCACGTCGTCAATTCCGCAGCAGAACCTCATATGCCTCGTGTTGTTACGCCGTTTCCTGCGCCGAAGATAATGGACCTTTCTCAGTTTCAAGGTGAGCACAAGGAGAGTTTGTATTGGGGAACTTATCGTCCCCATGTCTATCTCGGAATTCGTGCCAGGACTCCACAATCTTTGATCGCTGGATTGATGTGGATTGGTGTGAAGGATGGAAGATATCACTTGAGGCATGTTTGCAGACATGAGGATGACCTAAGTACTTATGGTTGGGTAAAGCATAATGGACGTGATTTTGGGCATCAAGTACTGGTTGACCATGGCATGACCTTGGCTACTGAATTTTTAAAATCAAAGGGGGGTGGCAGCGGTTATGGAGGTGACTGGGCAGTTCGAATTGGTGTGCAAATTGATAAGTCTAAATGGAATGAGGAATTTGGGAGAGGTGCCCAGCTCTTTTTCTACTTGGCTGATGAAGGTGGTAATGCTCTAGATGTAAGTAGAGAAAACTTGAACATTCATGAGGATTCTTTACTTGCATCTGGCTCTCGAATGGACATTGGAGACTGGCAGCTACATTTAAAATCAACGGATGATCTGGAATTGCATTATTCTGGATTTCACACACCTCACTTTCACAATTTGTCTGATCTTGTTGAGGAAAATCTTGCATCACAAATTAGAAAGCATGCCCGACTGCAGCTATCTGACTCATCAGATGATTCTCCAAACGTGTTAGTTTTTCAGATTATTGGTGGATTTCCTTTCACAACAGATATTGTACTTATCTCTGGAACTGATTCAAAAAGTTCAAGAGTAGAAGAGCGAGTCAGTAGTCTTACAGGCACCTCACTGTCCAGTCAACTGAAATATAAAGAACAGGCATTTGATGATAAGTTTGAGAAAATTTTCAATTTGGATGAGAAGGTGGATTCAGAATCCATATCTGTTGGTAAGGCTGCTGTTGGAAACTTGTTAGGTGGAATTGGCTACTTCTATGGCCAGTCAAAAATTGCTCTGTCAAGAATCCTTAATCTTAGAGAACATGTTGATTATATATCATATTGGCCTGCTGAGCTTTACACAGCTGTACCAAGTCGATCTTTCTTTCCAAGAGGATTTTTATGGGATGAAGGTTTTCATCAACTTTTAATCTGGCGTTGGGATATTCATATTTCATTGGATATCATTGGACACTGGTTAGATTTGATGAATGTTGATGGATGGATACCACGTGAACAAATTCTAGGGGCTGAAGCACTGAGTCGGGTCCCAGAGGAATTTGTTCCTCAGCATCCAACCAATGGAAATCCTCCTACTCTGCTTTTAGCATTAAGTGATATAATTAATGGCTTAAAGAATAATGAGTTTACTGCAACGGATGGAAGTGAGATCTCTCTGTTCCTGGAGCGTGCCTTTGTTCGAATAGAAGCATGGTTCCAATGGTTCAATACAACTCAGTCAGGGAAACAGATGAGCAGCTACTATTGGCATGGACGGGACAATAGGACAATGCATGAATTGAATCCCCAGACACTGTCCTCTGGATTTGATGATTATCCACGTGCTTCACACCCAAGTGCAGATGAACGGCACTTGGATCTTAGGTGTTGGATGTTACATGCGGCAGATTGTATGCATTCTATTGAAATGTTTTTGGACAAGGAAACCAAACCTGGCAAGAATTATGGTTCTACTGCTAAATTGCTATCAGATCTTGAGTTACTGAACCAGATGCATTTTGATGATGCATATGGTGCTTACTTTGATTTTGGAAATCATACCGAAAAGGTTCAACTTAAATGGAAAGAAATGGAGGTAGGACACAATTATATGGGTCGCCAGCTTGTCCGGGAAGTTTTGGAGAGGTCTGTATTGAGATTTGTTCCTCACATTGGTTATGTTAGTTTGTTCCCATTCATGGAGAGGATCATTCCATCAGGATCATGGATTCTGGAAAAGCAGCTTGAACTCATTTCAAATCACAGCCTCTTATGGACTGACTATGGACTACGTTCTCTTGCCAAAACAAGTTCCTTATACATGAAACACAACACAGAGCATGATGCTCCATATTGGAGAGGTCCAATTTGGATAAACATGAATTACAGAATTCTTTCAGCGCTCCACCATTACTCCAAAGAGAACGGGCCATATCAGGACAAAGCTAAAGTCATCTACAAAGAATTGAGAAGCAATTTAATTAGAAATATAGTACGCAATTATCAACAAACTGGATATTTGTGGGAACATTATGATCAGATTAAGGGCAAGGGAAAAGGGGCACATCCATTTACGGGTTGGACATCACTTGTAGTATTAATCATGGCGGAAGCATATGGCACACTTTAG 2553 0.4168 MTGTGRRTARSRVRSSSEADADSFRERRPKLNRHRSKYGSSIPLFDNFNLKVVLGISFLAFFIILFLIRHVVNSAAEPHMPRVVTPFPAPKIMDLSQFQGEHKESLYWGTYRPHVYLGIRARTPQSLIAGLMWIGVKDGRYHLRHVCRHEDDLSTYGWVKHNGRDFGHQVLVDHGMTLATEFLKSKGGGSGYGGDWAVRIGVQIDKSKWNEEFGRGAQLFFYLADEGGNALDVSRENLNIHEDSLLASGSRMDIGDWQLHLKSTDDLELHYSGFHTPHFHNLSDLVEENLASQIRKHARLQLSDSSDDSPNVLVFQIIGGFPFTTDIVLISGTDSKSSRVEERVSSLTGTSLSSQLKYKEQAFDDKFEKIFNLDEKVDSESISVGKAAVGNLLGGIGYFYGQSKIALSRILNLREHVDYISYWPAELYTAVPSRSFFPRGFLWDEGFHQLLIWRWDIHISLDIIGHWLDLMNVDGWIPREQILGAEALSRVPEEFVPQHPTNGNPPTLLLALSDIINGLKNNEFTATDGSEISLFLERAFVRIEAWFQWFNTTQSGKQMSSYYWHGRDNRTMHELNPQTLSSGFDDYPRASHPSADERHLDLRCWMLHAADCMHSIEMFLDKETKPGKNYGSTAKLLSDLELLNQMHFDDAYGAYFDFGNHTEKVQLKWKEMEVGHNYMGRQLVREVLERSVLRFVPHIGYVSLFPFMERIIPSGSWILEKQLELISNHSLLWTDYGLRSLAKTSSLYMKHNTEHDAPYWRGPIWINMNYRILSALHHYSKENGPYQDKAKVIYKELRSNLIRNIVRNYQQTGYLWEHYDQIKGKGKGAHPFTGWTSLVVLIMAEAYGTL* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01361 850 Gene3D - 375 848 IPR012341 GO:0005975
Rops2g01361 850 Gene3D - 93 374 IPR038518 -
Rops2g01361 850 Pfam Glycosyl hydrolase family 63 C-terminal domain 348 845 IPR031335 -
Rops2g01361 850 FunFam Mannosyl-oligosaccharide glucosidase GCS1 93 374 - -
Rops2g01361 850 FunFam mannosyl-oligosaccharide glucosidase 375 847 - -
Rops2g01361 850 SUPERFAMILY Six-hairpin glycosidases 358 848 IPR008928 GO:0005975
Rops2g01361 850 PANTHER MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE 53 847 IPR004888 GO:0004573|GO:0009311
Rops2g01361 850 MobiDBLite consensus disorder prediction 1 30 - -
Rops2g01361 850 MobiDBLite consensus disorder prediction 11 29 - -
Rops2g01361 850 Pfam Glycosyl hydrolase family 63 N-terminal domain 105 268 IPR031631 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01361 77 847 Glycoside Hydrolase AT1G24320 59.456 0.0 968
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01361 K01228 - gmx:100795691 1490.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01361 2 19500048 19510701 Rops2g01361 2 19500048 19510701 ECH