Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01333 ATGTCTGCTGCTGTGGGAGCTGTGTCCTCAACCAGAGATGTTCCCTTTAATGCTCATTTGGAGGAAGAGCTCAAAAACAAAGGAACCAACAAGGTTGGTGGGGAGCCAGACAGTGATGATGCCAGCTATGGTAATGCTGAAGAAACTGAGCCAGAGGAGGAGGAGGAGGAAGACCCCAAGTTGGAATTGGATCTTGGCCCTCAGTTTTCACTCAAGGAACAGCTCGAGAAAGATAAAGATGATGAAAGTTTGAGGAAATGGAAGGAGCAACTCCTTGGAAGTGTTGACATGTCTGCTGTTGGAGAGACCAAAGAGCCAGAAGTGAAGATAGTGAGCCTCACCATTATATGTCCAGGAAGGCCTGACATCATCCTTCCAATTCCATTCACTACTGATTCTAAGAAGAGTATCTTCACCCTTAAGGAAGGAAGCCAATACCACCTGAAATTCTCCTTCACTGTCTCCAACAACATTGTTTCTGGCCTCAAATATACCAATGTTGTTTGGAAAACTGGGGTTAGAGTGGACAAAATGAAAAAAATGTTGGGAACTTATAGCCCCCAGCTGGAACAATATACATATGAATTGGAAGAAGAAACTACCCCTTCAGGCTTGTTTGCTAGGGGCACCTATTCAGCAAGAACCAAGTTTGTAGATGATGATCACAAATGCTATTTGGATGCCAGTTACCACTTTGAAATTCAGAAGAATTGGCCTACACCCCACTGA 729 0.4417 MSAAVGAVSSTRDVPFNAHLEEELKNKGTNKVGGEPDSDDASYGNAEETEPEEEEEEDPKLELDLGPQFSLKEQLEKDKDDESLRKWKEQLLGSVDMSAVGETKEPEVKIVSLTIICPGRPDIILPIPFTTDSKKSIFTLKEGSQYHLKFSFTVSNNIVSGLKYTNVVWKTGVRVDKMKKMLGTYSPQLEQYTYELEEETTPSGLFARGTYSARTKFVDDDHKCYLDASYHFEIQKNWPTPH* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01333 242 Pfam RHO protein GDP dissociation inhibitor 49 237 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Rops2g01333 242 SUPERFAMILY E set domains 47 239 IPR014756 -
Rops2g01333 242 FunFam Rho GDP-dissociation inhibitor 1 61 240 - -
Rops2g01333 242 Gene3D Coagulation Factor XIII, subunit A, domain 1 62 240 IPR024792 -
Rops2g01333 242 MobiDBLite consensus disorder prediction 16 34 - -
Rops2g01333 242 PRINTS RHO protein GDP dissociation inhibitor signature 98 113 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Rops2g01333 242 PRINTS RHO protein GDP dissociation inhibitor signature 158 174 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Rops2g01333 242 PRINTS RHO protein GDP dissociation inhibitor signature 175 190 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Rops2g01333 242 PRINTS RHO protein GDP dissociation inhibitor signature 217 234 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Rops2g01333 242 MobiDBLite consensus disorder prediction 41 61 - -
Rops2g01333 242 MobiDBLite consensus disorder prediction 1 77 - -
Rops2g01333 242 PANTHER RHO GDP-DISSOCIATION INHIBITOR 47 239 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01333 Rops-Chr2 18993244 18994663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01333 K12462 - gmx:100806852 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03693 11 70459234 70461059 Rops2g01333 2 18993244 18994663 PCT