Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01332 ATGGCGGTGGAGGAGAGTATTGAGAGGGTAGCATTGGAGTGTTTGGGTAAAGGGTTCGATTTGACCAGTGATTTTCGTTTGAGGTTTGCTAAGGGAATTCGTGAAGGGAGGGGTAGTAAGAGGTTGGTGGTGCTTGATGAACAAAACAAGAGGGATATTTTGATTCCTGGAACTGGAGGAGCTACCATTAAAGGGGTTTCTGAGAATATTCGTTGTGATAAAGGGGATAGAATACGCTTCAAATCCGATGTACTTGAATTCAACCAGATGTCTGAGTTGCTTAATCAGAAATCAGCAGGACAAGGAAAAATCCCTTCTGGCTATTTCAATGTTCTATTTGATTTAAGCGGTGATTGGTTTCGTGATGCTGCTGACATCAAGTATCTTGCTTTTGATGGGTATTTCATTTCACTCTACAATTTGCACCTGACAGCTTCCCCGTTAATACTGCGAGAGGAAGTAAAGAAGTCTGTTCCAGCTCGGTGGGATCCAGCTTCATTGACCAGGTTCATCCAGACATATGGTACACACATAATAGTTGGCATGGCTGTTGGAGGTCAAGATGTAATCTGTGTCAAACAAAAATATTCTTCAAAGATTCCTCCTGGTGATCTCAGAAGACATTTAGAGGATCTTGGGGATTTTTTATTTTCAGATGTAAGAAGTCCTTCTTTACTACAGAGTAAGACTGCAGATGGCAAACAGAAGGTCCCCGAGGTCTTTAGTCGCGTGATGCAATCAAACACAATGCAGTTCAGCAGTATTTCAGAAACATCAAGCAAGGATGGCCTCACTATTATTTGCTCAAAAAGAGGTGGAGATATATTCAAGCACAGTCACTCAAATTGGCTCCAGACAGTGCCTTCTAATCCTGAAGCAATCCTGTTCAAGTTTGTTCCTATTTCCTCACTTCTGACTGGAATTCCTGGAAGTGGCTATCTTAGTCATGCAATCAATTTGTATTTACGCTATAAGCCTTCTCCTGAAGATTTACAATATTTCTTGGAGTTTCAAATTCCAAGGCAATGGGCACCCATGTTTTGCGAACTGCCTCTCAGGCATCAGCGGAGAAAGACTTCTTCCTCTTCCCTGCAATTTAGTTTCATGGGTCCTAAGCTTCATATCATCTCTACACAGGTGGTAAGTGAACAAAAACCTGTAGTTGGCCTCCGTTTATACTTGGAGGGCAGGAAATGTGATAGACTTGCTTTACATATAAATCACCTTTCAAGCCTCCCAAATAAGATGATCCTCTCTTCAGGCACCTCAACCCCAAGCACGCCATCCATGTGGCGAGGATCTGATGGCAATGAATCCAGTGACCAATTTCTGGAACCAATCAGATGGAAGAGATTCTCAAATGTGTGCACATCAGTGGTCAAGCATGATCCTAACTGGTTGAATAGTTCAGGAGGTGTTTATATTGTAACTGGTGCACAACTTCTTACCAAAGGAAGCTGGCCAAGGAATGTGCTTCATCTGCGCCTCCTCTTTACTCATATACCCAATTGCAGTATCAGGAAATCAGAATGGGCAGCTGCACCAGAGGCTTCAAGAAAATCATCTTTTCTCACAAATTTGAGCTCAACATTTTCATTCACACAGCAGAGTAACACTGGTCCCCCAAAGCAGCCTCCAACTGCACTCAACTCTGGCATTTATCCAGATGGTCCACCTGTGCCAGTTCGCTCTGGTAAGCTACTCAAGTATGTGGAGACATCTGAGGTTGTGAGGGGCCCACATGATGCTCCTGGCCATTGGTTGGTAACAGCTGCTAAGCTTGTGACTGAGGGTGGTAAGATTGGATTGCAGGTCAAGTTTGCTCTGTTAGATTACTGA 1839 0.4345 MAVEESIERVALECLGKGFDLTSDFRLRFAKGIREGRGSKRLVVLDEQNKRDILIPGTGGATIKGVSENIRCDKGDRIRFKSDVLEFNQMSELLNQKSAGQGKIPSGYFNVLFDLSGDWFRDAADIKYLAFDGYFISLYNLHLTASPLILREEVKKSVPARWDPASLTRFIQTYGTHIIVGMAVGGQDVICVKQKYSSKIPPGDLRRHLEDLGDFLFSDVRSPSLLQSKTADGKQKVPEVFSRVMQSNTMQFSSISETSSKDGLTIICSKRGGDIFKHSHSNWLQTVPSNPEAILFKFVPISSLLTGIPGSGYLSHAINLYLRYKPSPEDLQYFLEFQIPRQWAPMFCELPLRHQRRKTSSSSLQFSFMGPKLHIISTQVVSEQKPVVGLRLYLEGRKCDRLALHINHLSSLPNKMILSSGTSTPSTPSMWRGSDGNESSDQFLEPIRWKRFSNVCTSVVKHDPNWLNSSGGVYIVTGAQLLTKGSWPRNVLHLRLLFTHIPNCSIRKSEWAAAPEASRKSSFLTNLSSTFSFTQQSNTGPPKQPPTALNSGIYPDGPPVPVRSGKLLKYVETSEVVRGPHDAPGHWLVTAAKLVTEGGKIGLQVKFALLDY* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01332 612 Pfam MAC/Perforin domain 121 321 IPR020864 -
Rops2g01332 612 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 6 612 IPR044663 GO:0006952|GO:0012501|GO:2000031
Rops2g01332 612 MobiDBLite consensus disorder prediction 532 546 - -
Rops2g01332 612 SMART MACPF_8 126 323 IPR020864 -
Rops2g01332 612 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 335 IPR020864 -
Rops2g01332 612 MobiDBLite consensus disorder prediction 532 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01332 Rops-Chr2 18980516 18987441 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01332 - - gmx:100781070 1124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01332 2 18980516 18987441 Rops2g01332 2 18980516 18987441 ECH
Rops11g03691 11 70451145 70455245 Rops2g01332 2 18980516 18987441 PCT