Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00988 ATGGGAAGGTGGAGGTGGTGCACGTTGGTTTTCAATTTTGTTTCTTTGTTAATAATAACCGGAGCCATCTTGGAAGTGAAGACAGTGGAGGCTGTGAAGGGTGTTCCACTTGAGACAAATTCAAGGTGGATAGTGAACCAAGATGGTGAAAGGGTGAAGCTGGCGTGTGTGAATTGGGTGTCTCATATGGAAGCTGTGGTGGCTGAGGGGATGAGCAAGCAACCTTTGGATGTGATTTCAAAGGGAATCAAGTCCATGGGCTTCAACTGTGTTAGGCTCACTTGGCCTATTCTACTTCTCACCAATGACTCTCTTGCTTCTCTCACTGTTAGACACTCCTTTCAGAACCTTGGCCTCCTTGAATCTGTTGCTGGTGTCCAAGTCAACAACCCCTCCATCATTGATCTTACCCTCATCCAAGCTTTTCAGGCAGTGGTGAAAAGTCTTGGAGATCATGATGTGATGGTGATTTTGGACAACCACGTGACCCAGCCAGGGTGGTGCTGCGGTAACTCTGACGGCAATGGGTTCTTCGGTGACCGGTTTTTTGACCCGAACCAGTGGATACTAGGCCTCACCAAGATGGCCACACTTTTCAATGGAGTGGCTAATGTTGTGGGCTTTAGCTTGAGGAATGAGCTTCGAGGCCCTAGACAAAATGTCAACGATTGGTACAGGTACATGGTGAAAGGAGCAGAAGTGGTTCATGCAGCAAATCCAGATGTTCTTGTCATTCTATCTGGATTAAATTTTGACAAAGATTTGTCATTTATTCGGAATAGACCAGTGAGCCTCACATTCAAGGGGAAACTAGTATTTGAGGCACACTGGTATGCCTTCACTGATGGTCAAGCTTGGGTATCAGGGAACCCAAACCAAGTATGTGGAAACGTGGCTAAAAATATGATCACTACGTCAGGCTTCTTGGTGGACCAAGGATGGCCATTGTTTATAAGTGAATTTGGGTTTGACTTCAGAGGCACCAATGTGAATGACAATCGCTATCTTAACTGCTTCATAGCAGTGGCAGCTGAACTTGACTTGGATTGGGCTTTGTGGACACTTGTAGGCAGTTACTACTTTAGAGAAGGGGTTATAGGAATGGAAGAGTTTTATGGCCTTCTCAATTGGGACTGGACCCAAGTTAGAAATACCACTTTCTTACACAGAATTGCTGCCCTCCAACTTCCATTTCGAGGGCCAGGTATAACAGAAGGCGATCCATACAAACTGATATTCCATCCTTTGACGGGTCTCTGCGTTACAAGAAAGTCACTGCAAGAACCACTGACATTGGGTCCCTGCATTTTTTCTGATGGCTGGAAATACACACCCCAGAAGACACTGTTAATGAATGATGCTAACTCCTGCATGCAAGCGGAGAACGAAGGAAAGCCTGCAACACTTGGCAAATTATGCTTAGGTCCTAACTCTAAGTGGGAAATGATCTCAGATTCGAAGTTGCACCTTTCTTCCAAAATCAGCAGTGGTTCTGATGTTTGTCTAGATGTAGATGACAACAACATCATTGTGACCAATGCTTGTAAATGCTTGAGTACAGATCATACATGTGACCCTGGAAGCCAATGGTTCAAACTTATTGACAGTGGAAGAAGATCAATCTCTACAACCTCAACATTATCCATGCTGAATTTACCAGACCTTTTCTTGAAACCATGGAGCTCTACATAG 1692 0.448 MGRWRWCTLVFNFVSLLIITGAILEVKTVEAVKGVPLETNSRWIVNQDGERVKLACVNWVSHMEAVVAEGMSKQPLDVISKGIKSMGFNCVRLTWPILLLTNDSLASLTVRHSFQNLGLLESVAGVQVNNPSIIDLTLIQAFQAVVKSLGDHDVMVILDNHVTQPGWCCGNSDGNGFFGDRFFDPNQWILGLTKMATLFNGVANVVGFSLRNELRGPRQNVNDWYRYMVKGAEVVHAANPDVLVILSGLNFDKDLSFIRNRPVSLTFKGKLVFEAHWYAFTDGQAWVSGNPNQVCGNVAKNMITTSGFLVDQGWPLFISEFGFDFRGTNVNDNRYLNCFIAVAAELDLDWALWTLVGSYYFREGVIGMEEFYGLLNWDWTQVRNTTFLHRIAALQLPFRGPGITEGDPYKLIFHPLTGLCVTRKSLQEPLTLGPCIFSDGWKYTPQKTLLMNDANSCMQAENEGKPATLGKLCLGPNSKWEMISDSKLHLSSKISSGSDVCLDVDDNNIIVTNACKCLSTDHTCDPGSQWFKLIDSGRRSISTTSTLSMLNLPDLFLKPWSST* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00988 563 Gene3D - 412 531 - -
Rops2g00988 563 SUPERFAMILY Ricin B-like lectins 406 533 IPR035992 -
Rops2g00988 563 CDD RICIN 409 522 IPR000772 -
Rops2g00988 563 Gene3D Glycosidases 35 394 - -
Rops2g00988 563 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 24 536 - -
Rops2g00988 563 SUPERFAMILY (Trans)glycosidases 36 387 IPR017853 -
Rops2g00988 563 Pfam Cellulase (glycosyl hydrolase family 5) 75 355 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00988 Rops-Chr2 13828350 13832086 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00988 36 538 Glycoside Hydrolase AT1G13130 58.974 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00988 - - gmx:100790415 932.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00988 2 13828350 13832086 Rops2g00988 2 13828350 13832086 ECH