Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00973 ATGGAGCCGGTTGCAGAGAAATGGAGATCATGGGTTGTTGTAATTTCAACAGCACTAGTTGTAGTGGGAGTGCCACGTGGTGTCAGCTGTGGGAGGCAGTGTAGTTTCCCGGCCATATTCAACTTCGGAGACTCCAATTCAGACACAGGTGGTATTGCAGCAGCTTTCGGAGAAGCTCCTCCCCCCAACGGAATCACTTTTTTCCACGCTCCTGCCGGACGCTTCTCCGATGGTCGTCTCATCATTGATTTTATAGCAGCGAAAAGCTTGGGGTTGTCTTATCTTAGTGCCTACTTGGAGTCGGTAGGCTCAAACTTCAGCAACGGAGCCAATTTCGCAACGGCTGGATCCACCGTCAGACCTCAGAACACAACTAGATCTCAGAGTGGATATAGTCCCATATCCCTAGACGTTCAGTTTGTACAGTTATCTGATTTCAAAACTAGATCCAAACTCATTCGCAAACAAGGAGGGGTGTTTAAGAAATTGTTACCCAAAGAAGAGTACTTTTCTCAGGCTCTATACACCTTTGATATTGGCCAAAACGATCTCACTGCTGGCTACAAACTCAACTTGACCATAGAACAAGTCAAGGCATATATACCTGATGTATTAGGCCAGTTCTCCAATGTCATAAGGGGTGTGTATGGAAAAGGTGGAAGGTCGTTTTGGATACACAACACAGGTCCACTGGGATGCCTTCCATACATACTTGATCGCTATCCCATGAGTGCAGCCCAAATGGATGAGTTTGGGTGTGCCAAACCGTTCAACAAGGTGGCCCAATATTTTAACCTTAAATTGAAAGAAGCTGTTGAGCAACTGAGGAAAGAGCTGCCAGAAGCTGCAATCGTCTATGTTGATGTGTACACAGTGAAGTACACCCTCATTAGCCATGCCCAAAAATACGGTTTTGAGCATGGGGTGATAGCATGTTGTGGGCACGGTGGGAAGTACAACTTCAATAATGAAGCGAGATGTGGAGCTACCAAGAAGGTGAATGGGAAAGAAATTGTGATAGCCAAATCTTGCAATGATCCAAGTGTGAGGATTATTTGGGATGGGATCCATTACACTGAAGCTGCTAATAACTGGATCTTCCAACAAATAACCAGTGGATACTTTTCAGATCCACCTATCTCTTTAAAAATGGCATGTCATGGTCATACATCCATCCACCACCATTAG 1188 0.452 MEPVAEKWRSWVVVISTALVVVGVPRGVSCGRQCSFPAIFNFGDSNSDTGGIAAAFGEAPPPNGITFFHAPAGRFSDGRLIIDFIAAKSLGLSYLSAYLESVGSNFSNGANFATAGSTVRPQNTTRSQSGYSPISLDVQFVQLSDFKTRSKLIRKQGGVFKKLLPKEEYFSQALYTFDIGQNDLTAGYKLNLTIEQVKAYIPDVLGQFSNVIRGVYGKGGRSFWIHNTGPLGCLPYILDRYPMSAAQMDEFGCAKPFNKVAQYFNLKLKEAVEQLRKELPEAAIVYVDVYTVKYTLISHAQKYGFEHGVIACCGHGGKYNFNNEARCGATKKVNGKEIVIAKSCNDPSVRIIWDGIHYTEAANNWIFQQITSGYFSDPPISLKMACHGHTSIHHH* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00973 395 FunFam GDSL esterase/lipase At1g09390 27 375 - -
Rops2g00973 395 Pfam GDSL-like Lipase/Acylhydrolase 39 370 IPR001087 GO:0016788
Rops2g00973 395 CDD SGNH_plant_lipase_like 37 374 IPR035669 -
Rops2g00973 395 Gene3D SGNH hydrolase 28 374 IPR036514 -
Rops2g00973 395 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 22 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00973 Rops-Chr2 13669628 13679921 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00973 37 387 Acyl Lipid Metabolism Gene Families AT4G10950 29.121 2.77e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00973 - - gmx:100803899 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00973 2 13669628 13679921 Rops2g00973 2 13669628 13679921 ECH