Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00802 ATGGACGTGGAACTGAAGGCGGCGAAGACTGCTTACCGGAACGCCAAGGCAGAGGGGAACCACCGTGAGGAGGCACGGTGGGCCAACGTCATCGGCGACATACTGAAACACAGAGGAGAGTACGTCGAAGCACTCAAATGGCTTCGAATCGATTACGACGTTTCACTCAAGTATTTGCCAGAGAAGCACTTGCTTCCAACGTGTCAATCTCTCGGTGAAATCTATCTCCGTCTTGAACATTTCTCCGATGCCCTAATTTACCAGAAGAAGCATTTAGAACTTGCGAGGGACGCGAACGACGTCGTTGAGCAACAAAGAGCGTGCACGCAACTAGGTCGCACTTACCACGAGCTGTTTTCTAGATCGGATCACGATCATAACTCAATTCGCAATGCGAAGAAGTATTTCAAGTATGCGATGGAGCTTGCGGTGGATCTGAAGGAGAATCCACCAAATAACAAGAGTTCATTTCTCAAGGAATACATCGATGCACACAACAATATAGGAATGCTTGAAATGGATCTCGATAACTTGCACGAGGCGCAGAAAATGCTAACTAGAGGATTGGAGATTTGTGATGAAGAGGAAATTAGTGAATATGATGATGGGAGAAGCAGGCTTCACCATAACCTTGGGAATGTGTATATGGAACTTAGGATTTGGAATGAAGCTAGAAAAAATATTAAAAGGGATATTCAGATTTGTAACAGAATTGGACATTGCCAAGGGGAAGCAAAGGGTTATATTAATCTTGGTGAAGTGCATTATAGGACTCAGAAGTATGAAGAAGCAAGGTCTTATTATGAGAAGGCGCTTACTTTGGCGAAGTCATTGGAGGATGAGGATGCTTTGGCGAGGCAAATTGAACAGAATATTGAAACTGTGAGAGAAGCTGTTAAAGTGATGAATGAAATAAAGAGAGAAGAGCAGAATCTCAAGAAGATTAAAAGAGATATAGCCACGGCCAGAGGGACATCACACGAGCGCAAATGTTTGCTGCAGCAAAACGCATCTCTTGATCACCTTGTTGAGAAAGCAAGGATGATCTCCGCGTGGGAGAAGCATTGTGAATTTGCAAAGGAGAAGAAGAAAATAGCAAATGAACTTTGTGACAGGCAAAGGTTGGGTGATTCATATCTGGATGTTGGAGAATCATACCAGAAGCTCAGAAAATTCAACAAAGCAATCAAATGGTACAAAAAGAGTTGGGAAATGTACAAAACAATTGGTAACTTAGAGGGGCAAGCACTGGTGAAAATTAATATTGGTAATGTTTTTGATTCTACTCACAATTGGAGAGATGCGTTGGATGCATTTCAAGAGAGCTACAGGATTGCCGTTGAAGCGGACCTTCCTGATTTACAGCTTTCTGCCTTGGAAAATATGCATTATAGCAACATGATCAGATTTGATGATGAGGATGAGTCCAGGAGATTGAAACTTCTAATTGATAAACTAAAGAAGTCAAATGAAGAAGAGCCAGAAGATAAATCTATGCCAGAGGATTGTTGCTCTGAGACTGATACTGAAGCAGATGATTATCTGTCAAATAGGGGGTCTGATGATTCATGCTTTCCAAAGACAATTTCTAGATCAAAAACTCTGGCTACTGGAGAAGAACCGAAAGATGACATGCCTCTAATGTCACTATATCAGTCCATAAAAGGCTCATCCAGAAATAAAACATGCCATGTGGAAAGTCTTGCCAACTCTGCCAAGCAGGCTGAGCAGTCACCCAAAAGTCAGATAAATCTAACCAGTGACCATCAGACAGTTGTTGGTCGTAAGCGTGTCCGTGTAATTCTTTCTGACGACGAAGATGATGAGATGGAGTGTTCAAGCAAAAAGGATCATGATTGTCTGTTAGCGGACTTGCCCACTAATGATACAGTTAAGAGTAAAGTCAGTCCTCATAAAATTCAGGTTGTCTCAGAGCATGGATCCAAATGTGCTATTAATGTTGAAGAAAGTAGTAGTTCTTTCAAATGCTGGAGTCCATGTACAGCTACTAAAACTGGCAGACATTCTGGATCTTTGAGCAATGATATAGTTGCTGAACCTAATTTCCCTAGTGACTCTAAATATGACACGGATGTCTCTGGCAAGCAAAATGGTGTTGCCCATCCCATGTTTCATAATTCCCAAAATGACCTGCAGCAATATATTACATGCTGGATTGGGAATGATCTAATTCATGTAGAAGCATCCTTGTGCACTTCCGATGATCAGTTGAATATTGACTCATTAAAGGCTGTAGTTGCATGCTTATATTATCTTCAATTTCCGACAGAAAAGAGATCAGAGGGTTTGTTGCCCATTATTCAGCACATAAAATGTGCTGGAACAGATCTAGAATCCCTGGAAACTATCGAAAAGCTTAAGGAACATCTGGGAAATGATGCGGTTGAAGTTTCCATTGATGGATGGATTCACAAGCGTCTAATAAAAATGTATGTAGACTGCTGCAAGGAGTTGTCAGAGGTACCAAATATGAAGGTACTGAAGAAACTTTACAATTTAGAGGTTTCAGATGATGAAATCATTGTGTCTGACTGTGACCTGCAAGATTTGTCTATAACACCATTGATAAATGCACTGCAATCTCAAAAGGAATTTTCCATGCTTGACATCTCTCACAATCTGTTAGGAAATGGGACAATGGAGAAACTTCAAAAGGTGTTTGCAGCATCAGGCCAATCTTATGGTGACTTAAGTCTGGATTTGCATTGCAATCGATTCGGCCCATCGGCTTTGTTTCAGATTTGTGAGTGCTCAGTGCTATTTGCTCGACTAGAAGTGCTTAACATTTCTGGAAACCGTCTTACTGATGCATGTGGATCTTATCTTTCAACAATCTTGAAAAACTGTACAGCTCTTTGTAGCTTGAATGTAGAGAACTGTTGTATCACTTCCAGAACTATTCAAAAAATTGCTGACACATTGGACTCTAGATCTGTACTTGCACATCTTTGTATAGGACACAACAGCCCTGTATCCGGAAATGCTATAGTTAATCTTCTGTCCAAGCTTTCTACTTTGAAAAGGTTTTCTGAGTTGAATATTAGTGGTCTAAAACTCGGCAAACCAGTCGTTGATGCCCTTTGCCAGCTTGCGGGAACCTTGAATTTATCAGGACTGATACTTGGAGGCACGGGTATTGGAACCGAAGGGGCGATAAAACTAGCAGAATCATTGCTCAAAGGAGAAGAGCTTGTGAAACTTGACCTATCGTATTGTGGGCTAACATCTAACTATATATTAAACATCAATGTTAATTTTTTTTGTTTCATCCTTGAGCTGAACCTGGAAGGAAATCCTATTATGCCTGAGGGCAGCGATACTCTATTTTCTCTTCTCATAAACCCACAGTGCTGTCTTAAAGTTTTGGTCCTTAGAAGGTGTCAACTTGGGCTTGCTGGAGTTCTTCACATAATTGAGGCACTGGCAGAGAACAGCTGCTTGGAGGACCTTAATCTTGCTGATAATTCTGCTCCAAATGAACTTTCTGCTCTACAATATGATTTATCAGCTAAAAGCAGCGCACAAAATCAGGAGCAGAAACCTGATAATATGAAAGTGGATGATAATCAAGAGGTTCTTTGCTCTCTAAACACTGCCTACAATCAACTGAAAGTTGCTGATAGTGAAGATATTCCAGTTAGAGGAGAAGCTGCTGCTTCTGGGATTGACGACAGCTGTGTCAGTTCATGTCAAAGAAATTCTTCATCTCCTGAGTGCCATTTCACTCAACAGCTTTCAATTGCTATTGGTAAGGCAAAGAACTTACAATTACTGGACCTTAGCAATAATGGTTTTTCTGCACAAGCTACAGAAACATTCTATGGTTCGTGGACAACTTTACGACCCCTTTCAAGTCACAAGCACGTTACTGAGCAGATTATTCATTTCTCAACGAAGGAAAATAAGTGCTGCAGAGTGAAACCTTGTTGCAAGAAAGTTTGA 3963 0.4095 MDVELKAAKTAYRNAKAEGNHREEARWANVIGDILKHRGEYVEALKWLRIDYDVSLKYLPEKHLLPTCQSLGEIYLRLEHFSDALIYQKKHLELARDANDVVEQQRACTQLGRTYHELFSRSDHDHNSIRNAKKYFKYAMELAVDLKENPPNNKSSFLKEYIDAHNNIGMLEMDLDNLHEAQKMLTRGLEICDEEEISEYDDGRSRLHHNLGNVYMELRIWNEARKNIKRDIQICNRIGHCQGEAKGYINLGEVHYRTQKYEEARSYYEKALTLAKSLEDEDALARQIEQNIETVREAVKVMNEIKREEQNLKKIKRDIATARGTSHERKCLLQQNASLDHLVEKARMISAWEKHCEFAKEKKKIANELCDRQRLGDSYLDVGESYQKLRKFNKAIKWYKKSWEMYKTIGNLEGQALVKINIGNVFDSTHNWRDALDAFQESYRIAVEADLPDLQLSALENMHYSNMIRFDDEDESRRLKLLIDKLKKSNEEEPEDKSMPEDCCSETDTEADDYLSNRGSDDSCFPKTISRSKTLATGEEPKDDMPLMSLYQSIKGSSRNKTCHVESLANSAKQAEQSPKSQINLTSDHQTVVGRKRVRVILSDDEDDEMECSSKKDHDCLLADLPTNDTVKSKVSPHKIQVVSEHGSKCAINVEESSSSFKCWSPCTATKTGRHSGSLSNDIVAEPNFPSDSKYDTDVSGKQNGVAHPMFHNSQNDLQQYITCWIGNDLIHVEASLCTSDDQLNIDSLKAVVACLYYLQFPTEKRSEGLLPIIQHIKCAGTDLESLETIEKLKEHLGNDAVEVSIDGWIHKRLIKMYVDCCKELSEVPNMKVLKKLYNLEVSDDEIIVSDCDLQDLSITPLINALQSQKEFSMLDISHNLLGNGTMEKLQKVFAASGQSYGDLSLDLHCNRFGPSALFQICECSVLFARLEVLNISGNRLTDACGSYLSTILKNCTALCSLNVENCCITSRTIQKIADTLDSRSVLAHLCIGHNSPVSGNAIVNLLSKLSTLKRFSELNISGLKLGKPVVDALCQLAGTLNLSGLILGGTGIGTEGAIKLAESLLKGEELVKLDLSYCGLTSNYILNINVNFFCFILELNLEGNPIMPEGSDTLFSLLINPQCCLKVLVLRRCQLGLAGVLHIIEALAENSCLEDLNLADNSAPNELSALQYDLSAKSSAQNQEQKPDNMKVDDNQEVLCSLNTAYNQLKVADSEDIPVRGEAAASGIDDSCVSSCQRNSSSPECHFTQQLSIAIGKAKNLQLLDLSNNGFSAQATETFYGSWTTLRPLSSHKHVTEQIIHFSTKENKCCRVKPCCKKV* 1321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00802 1320 SMART tpr_5 416 449 IPR019734 GO:0005515
Rops2g00802 1320 SMART tpr_5 245 278 IPR019734 GO:0005515
Rops2g00802 1320 SMART tpr_5 65 98 IPR019734 GO:0005515
Rops2g00802 1320 SMART tpr_5 376 409 IPR019734 GO:0005515
Rops2g00802 1320 SMART tpr_5 162 195 IPR019734 GO:0005515
Rops2g00802 1320 SMART tpr_5 205 238 IPR019734 GO:0005515
Rops2g00802 1320 Pfam Tetratricopeptide repeat 379 446 - -
Rops2g00802 1320 Pfam Tetratricopeptide repeat 205 277 - -
Rops2g00802 1320 Gene3D Tetratricopeptide repeat domain 2 314 IPR011990 GO:0005515
Rops2g00802 1320 Coils Coil 261 325 - -
Rops2g00802 1320 SUPERFAMILY TPR-like 161 445 IPR011990 GO:0005515
Rops2g00802 1320 Gene3D Tetratricopeptide repeat domain 315 468 IPR011990 GO:0005515
Rops2g00802 1320 SUPERFAMILY RNI-like 835 1286 - -
Rops2g00802 1320 ProSiteProfiles TPR repeat profile. 376 409 IPR019734 GO:0005515
Rops2g00802 1320 Gene3D Ribonuclease Inhibitor 821 1219 IPR032675 -
Rops2g00802 1320 MobiDBLite consensus disorder prediction 489 504 - -
Rops2g00802 1320 FunFam Protein TONSOKU 821 1192 - -
Rops2g00802 1320 SMART LRR_RI_2 1094 1121 - -
Rops2g00802 1320 SMART LRR_RI_2 1040 1067 - -
Rops2g00802 1320 SMART LRR_RI_2 956 983 - -
Rops2g00802 1320 SMART LRR_RI_2 869 896 - -
Rops2g00802 1320 SMART LRR_RI_2 928 955 - -
Rops2g00802 1320 SMART LRR_RI_2 1123 1150 - -
Rops2g00802 1320 FunFam Protein TONSOKU 1 154 - -
Rops2g00802 1320 ProSiteProfiles TPR repeat region circular profile. 245 274 - -
Rops2g00802 1320 PANTHER PROTEIN TONSOKU 2 1319 IPR044227 GO:0005634|GO:0006325|GO:0009933|GO:0040029|GO:0072423
Rops2g00802 1320 ProSiteProfiles TPR repeat profile. 245 278 IPR019734 GO:0005515
Rops2g00802 1320 MobiDBLite consensus disorder prediction 489 510 - -
Rops2g00802 1320 SUPERFAMILY TPR-like 12 151 IPR011990 GO:0005515
Rops2g00802 1320 FunFam tonsoku-like protein 309 469 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00802 - - aprc:113856161 2189.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00802 2 11561937 11572311 Rops2g00802 2 11561937 11572311 ECH