Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00789 ATGGTGAGGCTTTTAGGGTTGACTCGTGGTTTTGCCGATGAACCCCGTGAAATTGTGTCCAGGTCAAACCTGACCAGTGAGTCTAGTGAAAATGGATGGCTCATTAGGTTCTTTGACTCGGCGTTCTTCTGTGAGTGGATTGCTGTTAGCTACTTGTACAAGCATGATCATGCCGGGGTGCGTGATTATCTCTGTAATAGAATGTACACTCTTCCCTTGCAAGGGCTTGAGAGTTATTTGTTCCAAATATGTTACATGATGATACACAAGCCTAGTCCGTCGTTGGATAAATTTGTGATTGATATGTGCTCAAAGTCGCTTAAGATTGCTTTGAAGGTACATTGGTTCTTGTTGGCAGAGCTTGAGGACTCTGATGATAATGAAGGGATTAGTAGGATTCAGGAGAAGTGTCAGATTGCGGCTACCTTGTTGGGTGAGTGGCCGCCTCTGATACGGCCTCAAACTGAACCTCCAAGTCCTGGAGGCAAGAGCCAGGTTTTGAATAGGTTACTTTCGTCGAAGAATCGATTTTTGTCATTAACATCCTCGCCGCCTACTCAAAAGTCGTTATCATTTTCACCTTCCTCAGGAAACAATTTGCAAGAGGATGGCAATCCGCTGTCTCCTGATGAGAACAAGATATTTAAGAAGTTTATCCCGAGTCCAAAGGTTAGAGATGCTTTGCTTTTTAGGAAGTCAGTGGACAAAGATGATGATGATTCAGAAAAGGATGGGTTTTTCAAGAGGCTTTTGAGAGATGGCAAAAGTGATGACGAGCTGGGCCCAAAAATTCGTGATGCATTTCTTTTTTGGAAGTCGTCTGAGAAAGATGATGAAGACTCTGAAAAAGATAATTTCTTTAAAAGGTTATTAAGGGACAATAGAGACAGTAGAGGTGATGATGAAGACTCTGAAAAGGATGGTTTCTTTCGAAGGTTCTTAAGGGACAGTAGAAGTGAAGATGAGGATGTGAGCTCAAGTTCAGAGGGATTTTTTAAAAGGTTGTTTCGTGATAGCAAGAATGATTCTGAGGACAGAACATACACTAAATCAATGGAAGATGAAGAGAAAGAGGGATTTTTCCGAAAGATTTTCCGGGAGAAATCTGAAGATAGGAAGGATGGGAATGATAGGAGTGAAAACAGAGATATTGTTAATTCTGAAGAGAAATGTGCAAAAACTGCTGAAGAGGATGAAAAAGAAGGGTTTTTCCGGAAATTCTTTAAGGATAAATTTGAGGACAAGAAAGATACTAATGATAAAATTGAAGAGGGTACTGCCAATGGTGAGGATGAAGAGCCTTCTGAGTTTTCCTTGTTCAAAAGACTATTTCGTGTGCACCCTGAAGTTGCTAAAAATAGTTTGGCCAATGAAAACAGCAATAATGGTGGCTTATTTGAAAGCAGTCCAGGTACAGAAATTTTTTTCCGTAAATTGTTCAGAGACCGTGACCGTTCAATTGAAGATTCAGAGCTATTGGGGTCAAAGAGACAGAAAGAGAAGCATCCTGGATCTCCAAAGCAGAGTGAGAAGTCGAGCACAAAGCCCCCATTACCAAGTGTATCACAGTTCCGGAAAGGGGCTTACCATGACTCCTTGAAGTTTGTGCAATCATTATGTGATACATCATATGGGCTAGTGGATGTATTTCCGATTGAAGATCGCAAAAGTGCTCTTTGTGAGTCGCTTGCAGAGATCAATATAGATATAGCAGAGGCTCAGAACACTGGAGGAGTTTGTTTTCCACTGGGAAAGGGCATGTATCGTGTGCTTCATATACCTGAAGATGAAGCCGGTCTCTTGAATTCTAGGGAGAAGGCTCCTTACCTGATCTGCATAGAAGTTTTGAGATGTGAAATGCCAAGTAATTCCAAGGAGACATCCAGTTCTCAAAAACTTTCTCAAGGTGGAATTCCTCTGGCAAATGGGGATGCTCTCTTGGAAAAACCACCCCCTTGGGCTTATCCATTATGGACAGCACAAGAGGTGTACCGTAATAGCAATGATAGGATGTCCAGATCAACTGCTCAAGCAATTGACCAGGCAATGACTCATGTATCTGAGACAAAAATCAAATTTGTTAGTGTGAATCTTTCCGTAGAAACACAATTAAATGGTCAGCCAGAGAAGACTGCAGTGGCTGATCTACGTGGTGGCGGTCAGCATCCTGTTTCAATTTATAAAGAGGGTGTACATGAAGCAGCAGGAGCAGGACATGATAGTGATTTGGAATGGGTACGAGTAGTGTTGACAGCTGATCTTGGGGTCAGATTGGAAGATATTGAGGATCAAGCACCACCTCGGAGGAAGGAACATCGCCGTGTTCCAAGTACAGTGGCAATAGAGGAAGTAAAGGCTGCGGCAGCAAAAGGGGAAGCACCCCTTGGACTCCCTTTGAAAGGTGCTGGTCAAGATTCATCAGATGCACAACCAAGGGCTAATGGAATTACTCCCAAAGCCAGTGATGCCTTGTCTGGTGAACTTTGGGAGGCAAAGAAAGATAGGGTACAGAAGGCTTCCATATATGGGAAGTTACCTGGTTGGGACTTACGATCGGTTATTGTAAAGAGTGGTGATGATTGCAGGCAGGAGCATCTGGCTGTTCAGCTTATTTCTCACTTCTATGATATTTTCCAAGAAGCTGGTTTACCTCTCTGGCTGCGCCCGTATGAAATTTTGTGTACTTCTTCTTATACAGCTCTCATTGAAACAATTCCGGATACGGCTTCTCTACATTCTATCAAAAGTAGATATCCCAACATCTCAAGTTTACGTGACTTCTTCAATGCTAAGTATCAAGAAAATTCTCCAAGTTTTAAACTTGCCCAGAGGAACTTTGTTGAGAGTATGGCAGGATATTCCCTAGTGTGCTACTTTTTGCAGGTGAAGGATAGGCATAATGGGAACCTCCTTTTGGATGAAGAAGGTCATATCATACATATTGATTTTGGTTTCATGCTTTACAATTCCCCTGGTGGTGTTAACTTTGAAAGTGCACCTTTCAAATTAACACGTGAGCTTCTTGAGGTTATGGATTCTGATGCTGAGGGTGTTCCAAGCGAGTTTTTTGATTATTTTAAGGTTTTATGCATTCAAGGCTTCCTTACCTGCCGCAAGCATGCTGAGCGCATTATTCTTCTTGTTGAGATGTTGCAGGATTCGGGTTTCCCATGCTTTAAAGGTGGTACACGTACAATACAGAACTTACGAAAGCGATTCCATCTTGGTTTAACAGAAGAGCAATGTGTCTCCTTGGTGCTTTCGCTTATTAGCAGTAGCCTGGATGCTTGGAGGACACGACAATATGATTATTATCAGAGGGTTTTGAATGGAATATTGTGA 3342 0.4222 MVRLLGLTRGFADEPREIVSRSNLTSESSENGWLIRFFDSAFFCEWIAVSYLYKHDHAGVRDYLCNRMYTLPLQGLESYLFQICYMMIHKPSPSLDKFVIDMCSKSLKIALKVHWFLLAELEDSDDNEGISRIQEKCQIAATLLGEWPPLIRPQTEPPSPGGKSQVLNRLLSSKNRFLSLTSSPPTQKSLSFSPSSGNNLQEDGNPLSPDENKIFKKFIPSPKVRDALLFRKSVDKDDDDSEKDGFFKRLLRDGKSDDELGPKIRDAFLFWKSSEKDDEDSEKDNFFKRLLRDNRDSRGDDEDSEKDGFFRRFLRDSRSEDEDVSSSSEGFFKRLFRDSKNDSEDRTYTKSMEDEEKEGFFRKIFREKSEDRKDGNDRSENRDIVNSEEKCAKTAEEDEKEGFFRKFFKDKFEDKKDTNDKIEEGTANGEDEEPSEFSLFKRLFRVHPEVAKNSLANENSNNGGLFESSPGTEIFFRKLFRDRDRSIEDSELLGSKRQKEKHPGSPKQSEKSSTKPPLPSVSQFRKGAYHDSLKFVQSLCDTSYGLVDVFPIEDRKSALCESLAEINIDIAEAQNTGGVCFPLGKGMYRVLHIPEDEAGLLNSREKAPYLICIEVLRCEMPSNSKETSSSQKLSQGGIPLANGDALLEKPPPWAYPLWTAQEVYRNSNDRMSRSTAQAIDQAMTHVSETKIKFVSVNLSVETQLNGQPEKTAVADLRGGGQHPVSIYKEGVHEAAGAGHDSDLEWVRVVLTADLGVRLEDIEDQAPPRRKEHRRVPSTVAIEEVKAAAAKGEAPLGLPLKGAGQDSSDAQPRANGITPKASDALSGELWEAKKDRVQKASIYGKLPGWDLRSVIVKSGDDCRQEHLAVQLISHFYDIFQEAGLPLWLRPYEILCTSSYTALIETIPDTASLHSIKSRYPNISSLRDFFNAKYQENSPSFKLAQRNFVESMAGYSLVCYFLQVKDRHNGNLLLDEEGHIIHIDFGFMLYNSPGGVNFESAPFKLTRELLEVMDSDAEGVPSEFFDYFKVLCIQGFLTCRKHAERIILLVEMLQDSGFPCFKGGTRTIQNLRKRFHLGLTEEQCVSLVLSLISSSLDAWRTRQYDYYQRVLNGIL* 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00789 1113 Gene3D - 777 905 - -
Rops2g00789 1113 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 830 1098 IPR000403 -
Rops2g00789 1113 SMART pi3k_hr1_6 852 1111 IPR000403 -
Rops2g00789 1113 MobiDBLite consensus disorder prediction 795 820 - -
Rops2g00789 1113 CDD PI4Kc_III_beta 821 1113 - -
Rops2g00789 1113 MobiDBLite consensus disorder prediction 180 213 - -
Rops2g00789 1113 MobiDBLite consensus disorder prediction 369 396 - -
Rops2g00789 1113 Pfam Phosphatidylinositol 3- and 4-kinase 852 1059 IPR000403 -
Rops2g00789 1113 MobiDBLite consensus disorder prediction 490 508 - -
Rops2g00789 1113 Gene3D - 910 1111 IPR036940 -
Rops2g00789 1113 FunFam phosphatidylinositol 4-kinase beta 1 746 905 - -
Rops2g00789 1113 MobiDBLite consensus disorder prediction 490 521 - -
Rops2g00789 1113 SUPERFAMILY ARM repeat 54 126 IPR016024 -
Rops2g00789 1113 ProSiteProfiles PIK helical domain profile. 1 140 IPR001263 -
Rops2g00789 1113 MobiDBLite consensus disorder prediction 180 206 - -
Rops2g00789 1113 FunFam Phosphatidylinositol 4-kinase beta 1 910 1111 - -
Rops2g00789 1113 PANTHER PHOSPHATIDYLINOSITOL KINASE 44 1113 IPR015433 GO:0046854|GO:0048015
Rops2g00789 1113 Gene3D - 48 140 IPR042236 -
Rops2g00789 1113 SUPERFAMILY Protein kinase-like (PK-like) 557 1106 IPR011009 -
Rops2g00789 1113 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 855 869 IPR018936 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00789 Rops-Chr2 11301060 11318923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00789 1 1112 Lipid Metabolism Gene Families AT5G09350 69.904 0.0 1550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00789 K19801 - gmx:100778394 1916.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00789 2 11301060 11318923 Rops2g00789 2 11301060 11318923 ECH