Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00774 ATGAACCTCCACAAACTTCCTCGCTCTCTTCCTCCTTCTTCTTCTTCTTCAGGGAACTTATTCTTTCTCGTTGGTCATCACACGAGAATTTTCGATAATAGCTTCTTCCGCAAGAATCAGAGAGGTTTGAAGAAACGTTTCGGAGTGTCCATATCGTGTTCGAGCGGTGTTGTTGGGAATGGTTCTTCTCTGCCTTCTATTGAGCAACTCAGTGATGCGCGTGTCATATATTCCGTTGCTCCATCCATGGGCCATAACCAGGAGTCTCATCCAGAATCACATTTTCGAGTTCCTGCAATTGTGAATGCTCTAGAAGAAATGAAGCTCACTCCAAAGTTCCGTGGCTCTGAGGTAATTGAACTTCTACATTTTGAGCCAGCTTCAGTTGATGACATTGCAAGTGTGCATGCAAGAGCCTATGTTTCTGGGCTTGAAAAGGTTATGGATCAAGCTTTGGAGAAAGGCCTAATTTTCATTGATGGTTCCGGACCAACATATGCTACTGCTACTACTTTCCAGGAGTCAATAGTTGCAGCTGGTGCTGGATTAGCCTTAGTTGACTCAGTGGTTACAGCTTCAAAGATAAAGAGAGATCCACCCACTGGTTTTGCTTTGATAAGACCGCCTGGACATCATGCTGTTCCAAAAGGACCTATGGGCTTCTGCATTTTCGGAAATGTGGCCATTGCAGCTCGTTATGCTCAGCGTGTTCATGGACTAAAGCGCGTGTTTATAATTGACTTTGATGTTCACCATGGGAATGGAACAAATGATGCTTTCTATGATGATCCGGATGTATTTTTCCTTTCATTTCATCAAGATGGAAGCTATCCAGGTACCGGTAAATTTGATGAGGTGGGTACTGGTGATGGTGAAGGAACCACACTAAATCTGCCTCTTCCTGGTGGCTCTGGTGACACTACTATTAGAACTTTATTCGATGAAGTCGTTGTACCATGTGCTCAAAGATTTAAGCCAGACATCATTCTTGTTTCTGCCGGGTATGACGGCCACGTGTTGGATCCACTAGCAAATCTTCAATATACAACTGGAACATATTACATGCTTGCATCCAGTATCAAACAACTAGCAAAAGATTTATGTGGGGGCAGATGTGTGTTTTTCTTGGAAGGAGGATATAATCTCAAGTCTCTTTCATATTCAGTGGCAGACACATTCCGTGCTTTACTCGGGGATGGAAGCTTGGCATCTGAGTTTGATGACCCCAACGTTTTGTATGAAGAGCCAACAACAAAGGTTAAGCAAGCAATTCAGAGGATAAAACACGTTCATTCCCTGTGA 1302 0.4347 MNLHKLPRSLPPSSSSSGNLFFLVGHHTRIFDNSFFRKNQRGLKKRFGVSISCSSGVVGNGSSLPSIEQLSDARVIYSVAPSMGHNQESHPESHFRVPAIVNALEEMKLTPKFRGSEVIELLHFEPASVDDIASVHARAYVSGLEKVMDQALEKGLIFIDGSGPTYATATTFQESIVAAGAGLALVDSVVTASKIKRDPPTGFALIRPPGHHAVPKGPMGFCIFGNVAIAARYAQRVHGLKRVFIIDFDVHHGNGTNDAFYDDPDVFFLSFHQDGSYPGTGKFDEVGTGDGEGTTLNLPLPGGSGDTTIRTLFDEVVVPCAQRFKPDIILVSAGYDGHVLDPLANLQYTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNLKSLSYSVADTFRALLGDGSLASEFDDPNVLYEEPTTKVKQAIQRIKHVHSL* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00774 433 Gene3D Histone deacetylase domain 67 432 IPR037138 -
Rops2g00774 433 PRINTS Histone deacetylase superfamily signature 208 231 IPR000286 -
Rops2g00774 433 PRINTS Histone deacetylase superfamily signature 242 257 IPR000286 -
Rops2g00774 433 PRINTS Histone deacetylase superfamily signature 326 336 IPR000286 -
Rops2g00774 433 SUPERFAMILY Arginase/deacetylase 86 400 IPR023696 -
Rops2g00774 433 CDD HDAC_classII 90 397 - -
Rops2g00774 433 Pfam Histone deacetylase domain 90 395 IPR023801 -
Rops2g00774 433 PANTHER HISTONE DEACETYLASE 2-RELATED 63 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00774 Rops-Chr2 11056090 11061884 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00774 - - gmx:100788664 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00774 2 11056090 11061884 Rops2g00774 2 11056090 11061884 ECH