Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00765 ATGCTTGTGGAGGAGGGGTGTGAGGTGGTGGAAGGTGGTGGAGGGGGTGGGGGTGGTGCTGGGGGTGGTGGGGGCGATGCTGGTGGAGTGGTGGAGGGGGTGAGGGCAAAATACACTTTCTTCAACTCAGTTCCGCTTTCTATATCTTTATCTCTTCCATTTCGTTCAGGTGAAAGAAAGACTCTAGTTATGGGAAATAGAGAGTCAACATATGATTCTCATGATGATTCATTTCGACAATCCCCTCCCTATGTTGGGAGTTCTGCGAATTCTAACTATCAGTATCATCAACCCTCTTCTCATGCTGAAAGTTCTGGAAGTTCTGCGAATTCTAACTATCAATATCATCAACCCTCTTCTCATGCTGAAAGTTCAGTGAATAATAGATATCAACATAAGCAGCGACCCACATATATAGCTGACACTTTCAGTTCATTGGATCAGGTTGTTTCTGCTCTGAGAGAAGCTGGACTGGAATCTTCAAATTTAATACTTGGTATTGACTTCACCAAAAGCAATGAGTGGACAGGCAAGCACTCCTTCAACCACAAAAGCCTTCATTCTATTGGAAACACTCCTAATCCATATGAGCAAGCAATCTCTATCATTGGCCCTACTCTCTCTTCATTTGATGAAGATAATCTGATACCATGTTTTGGATTTGGTGATGCATCTACACATGATCAGAATGTGTTCAGCTTTTATCCTGATCATCGCTGTTGTTATGGTTTCGAGGAAGCACTTGTACGCTATAGAGAGATTGTTCCACACTTAAAATTGGCAGGTCCAACATCATTTGCCCCTGTAATCGACGCAGCAATTGACATTGTGGAGAGAAGCAATGGTCAATATCATGTTCTTGTCATTATAGCTGATGGACAGGTTACTAGAAGTTCAGATACACCACATGGAAAGCTTAGTCCACAAGAACAAGCTACTGTTAACTCCATCATTGCTGCAAGTCACTATCCTCTCTCAATAATTTTGGTCGGAGTTGGAGATGGACCATGGAATGAAATGCAGCATTTTGATGATAACCTTACTCAGCGCTTATTTGACAACTTTCAGTTTGTGAATTTCACAAAGATAATGTCTGAGAACAAGGAGCCATCAAAGAAGGAAGCAGCATTTGCACTTGCTGCCCTTATGGAAATTCCAATTCAGTACCGGATAGCCCAAAATCTACAAGTTGCCAAAGGAGAATCAATAAGTTATCAACGTAAAAAGCCTCTCCCTCCTCCTAAGGAAGTAATAGATCATGACAATGCAGTCCTAGCAGTTTCACATGTGACAGGTTTTGAATCAGTTGAGCCAACAGCTCCAGCTGCAGTAGAATCAGCATGCCCTGTTTGCCTAACCAATCCCAAGGACATGGCTTTTGGATGTGGTCATACGACTTGCAAGGAGTGTGGGGTGACATTATCTTCATGCCCTATGTGCCGGGAACAAATTACAACTCGCCTGAGACTATACACTTGA 1479 0.4287 MLVEEGCEVVEGGGGGGGGAGGGGGDAGGVVEGVRAKYTFFNSVPLSISLSLPFRSGERKTLVMGNRESTYDSHDDSFRQSPPYVGSSANSNYQYHQPSSHAESSGSSANSNYQYHQPSSHAESSVNNRYQHKQRPTYIADTFSSLDQVVSALREAGLESSNLILGIDFTKSNEWTGKHSFNHKSLHSIGNTPNPYEQAISIIGPTLSSFDEDNLIPCFGFGDASTHDQNVFSFYPDHRCCYGFEEALVRYREIVPHLKLAGPTSFAPVIDAAIDIVERSNGQYHVLVIIADGQVTRSSDTPHGKLSPQEQATVNSIIAASHYPLSIILVGVGDGPWNEMQHFDDNLTQRLFDNFQFVNFTKIMSENKEPSKKEAAFALAALMEIPIQYRIAQNLQVAKGESISYQRKKPLPPPKEVIDHDNAVLAVSHVTGFESVEPTAPAAVESACPVCLTNPKDMAFGCGHTTCKECGVTLSSCPMCREQITTRLRLYT* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00765 492 MobiDBLite consensus disorder prediction 68 129 - -
Rops2g00765 492 SMART VWA_4 160 363 IPR002035 -
Rops2g00765 492 MobiDBLite consensus disorder prediction 76 129 - -
Rops2g00765 492 SUPERFAMILY vWA-like 161 344 IPR036465 -
Rops2g00765 492 SUPERFAMILY RING/U-box 443 487 - -
Rops2g00765 492 Pfam Copine 185 395 IPR010734 -
Rops2g00765 492 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 437 492 IPR013083 -
Rops2g00765 492 SMART ring_2 448 480 IPR001841 -
Rops2g00765 492 Pfam Zinc finger, C3HC4 type (RING finger) 445 486 - -
Rops2g00765 492 PANTHER COPINE FAMILY PROTEIN 1 99 469 - -
Rops2g00765 492 ProSiteProfiles Zinc finger RING-type profile. 448 481 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00765 Rops-Chr2 10849114 10861570 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00765 K16280 - gmx:100791316 745.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00765 2 10849114 10861570 Rops2g00765 2 10849114 10861570 ECH