Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00620 ATGCACATACGCCGTCTCAGACTCGACGATGACGACGACGACGAACAACAAGACGCAGTTCAGCCACAACCACCGCCACAGACAGTTACACATCAACCTCCAAACCCTAGCAATTTTCCACCGGAGCCCGTTGAAATCTCCGACGATGACTTCGTCGACGTCCCCGATGACCTATCTACGCCCTCTCCTCCGCAGGCGCCGGTTCCAGGCTGTCCTGTCAACGATTTTCTTTGCCGTCTTGGTTTGGGCCTAAAGAGAGACTGGCTGGGTTCTTGTCTTCGCGAACTCCAACGCTCCGTTAGGGGCTTCGAAGGGTTAGATGTCGCCACAAAGGCCAAACTCTGTTTCGAGCAATTTCTCCTTGCTGATATTAACTACTGTGGGAGTGGTGTGCTTCCTCCGAATGTTGATTCCATGCATCTTCAAGTTCTCCCTGGTCCCTATGTATTGCAGGTTGATGAAATAGTCAACATCACTTGTCCTCTACGAGGCAGATATCAACAAGCCCCTCCCGGACTTAAAAGGTGCCTGAAGTTGTCAATGACTGATGGCGTTCAGAGAGTGTTTGGAATGGAGTACAGGCCTACTCAAGCTCTTGAAGTTTGTGCACCTGCTGGTTTAAAGGTTGCTATATCTAATGTACACGTGCGTCGTGGAATTTTGATGCTGGTCCCTGAAACCATTGAAATTTTGGGAGGATCAGTTGAGCAGCTAGATGCAGCACGAAAGCGTCTGGTTGATGAATTAAATAAGCCACCCAGGGGGAAGAGAACAAAAAATGGAATGCTTCCTCCTTTAGCAACTAGAGCAACTCTTGCTGCATGGCCTTCGAGTGGAGTCGATGATCTTGGGCTCAGTGGTTCCACATTGCATAGGACTGATTCTGTCCAGGCAAACAACCAAGGTGCTGGTCTGAGGATGTCTACCACTGGTAATAGCTTAGCAACTGAAGATACCTTGCTTATGGGTGCAGAAAATGCTGCTTTCAATTCAATACCCCATGTGGTTTCTGACACTGAGGCCATGAATATCGATATTCAGAGGGTTACCATTCCTGTGTCCCATGCTAGTGCTATGGCAAACCAGTTTTCTTCCACTGTTTCAATGGTTGAGGAGATGCATATAGATACTTCTAATACCACCAGGGAAAATTCTGTTGGCAACCAATCTTCTCATTTGCACTCAAATGTTGCAGTGACACATACAGATACTGTTCATGTAACCAGAGAAAGTACTGTGGCTACTATGTGCTCTCCCATTGCTGAAAATGTTGAGACAGACAGGGATAGAACTCCTGTAATCACAGATAATGCTCCTCTGAGAGGATCCTCCTCCACCATTTCAAACAATGGTGATATCCCGACGGTTGATGCCAGTGACCATCCACTCATACTGTCTGGAGACCGAGAGGTTCCTTTCACATACTTAGCTAGTTTGTCAGCCAAGTGGGCTGCAATGAAGGAGAAAGCTCCTCTAGTTCGGGGTAAAATTAAGTGCTTTTTGACGGGTGTAAAAGGATTCCAGTATAAGAGAAGGACAACATACGAGCTTCAGGCATATGTAGATGACGGCAGCCTTATTTCCGAAATCCTCATTCATCATGATGTTGTACAGAAAGGAATTGGTTATTCACCTCAGGAGGTCACTGCAGCTCTTTCTTCTCCTGACACGAAAATAGTCCACAACATGAAGGAGACGATGCGTAAATTCCAGGCTTTTTTAGCAAACTTTGAGGGGGTAATACTTGTGGAATTAAATAGAAAATCTTCCCTTCCACTTGCATTAGGCATGAATCAAGGCTGTCCTCAATCTGATGCGTGGTTACTTCTGAGAAGGCTGAAGTCTCTTCACCCTGCGCAAGTTCAAAAACCTTCTCCTTCGGATCCAATTGTTTTGTCCCCGTAA 1905 0.4646 MHIRRLRLDDDDDDEQQDAVQPQPPPQTVTHQPPNPSNFPPEPVEISDDDFVDVPDDLSTPSPPQAPVPGCPVNDFLCRLGLGLKRDWLGSCLRELQRSVRGFEGLDVATKAKLCFEQFLLADINYCGSGVLPPNVDSMHLQVLPGPYVLQVDEIVNITCPLRGRYQQAPPGLKRCLKLSMTDGVQRVFGMEYRPTQALEVCAPAGLKVAISNVHVRRGILMLVPETIEILGGSVEQLDAARKRLVDELNKPPRGKRTKNGMLPPLATRATLAAWPSSGVDDLGLSGSTLHRTDSVQANNQGAGLRMSTTGNSLATEDTLLMGAENAAFNSIPHVVSDTEAMNIDIQRVTIPVSHASAMANQFSSTVSMVEEMHIDTSNTTRENSVGNQSSHLHSNVAVTHTDTVHVTRESTVATMCSPIAENVETDRDRTPVITDNAPLRGSSSTISNNGDIPTVDASDHPLILSGDREVPFTYLASLSAKWAAMKEKAPLVRGKIKCFLTGVKGFQYKRRTTYELQAYVDDGSLISEILIHHDVVQKGIGYSPQEVTAALSSPDTKIVHNMKETMRKFQAFLANFEGVILVELNRKSSLPLALGMNQGCPQSDAWLLLRRLKSLHPAQVQKPSPSDPIVLSP* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00620 634 SMART DUF1767_2 74 167 IPR033472 -
Rops2g00620 634 MobiDBLite consensus disorder prediction 437 453 - -
Rops2g00620 634 Gene3D - 123 249 IPR042470 -
Rops2g00620 634 MobiDBLite consensus disorder prediction 26 41 - -
Rops2g00620 634 FunFam RecQ-mediated instability protein (DUF1767) 123 249 - -
Rops2g00620 634 Pfam RecQ mediated genome instability protein 82 244 IPR013894 -
Rops2g00620 634 MobiDBLite consensus disorder prediction 432 453 - -
Rops2g00620 634 Pfam Recq-mediated genome instability protein 1, C-terminal OB-fold 472 613 IPR032199 GO:0000166
Rops2g00620 634 MobiDBLite consensus disorder prediction 1 67 - -
Rops2g00620 634 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1 70 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00620 Rops-Chr2 8822037 8832823 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00620 K10990 - gmx:100803734 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00620 2 8822037 8832823 Rops2g00620 2 8822037 8832823 ECH