Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00590 ATGGGAAAACCTGACGATGAAAAGTCCGAAGCAACCGATAGAGAGATCGACAGTAACACAAAATGCATTTCTAAACAACAAATTGTAGAGAAAGCTAATGAACGCCCTGAATGGTTACCTAATGGCTGGAATGTGGAAATCAGAACCCGAAAAAGTGGTTCACAGATGGGATCTGGATATAAGTGTTACATTGATCCATTGAATGGATACAAATTCTACTCCAAACCAGAGGTATTACGATTTCTTGAAACTGTGAAGGACAACAGCTGCACTCCCAAGAAGGAGACTGTAAAGGACAACAGCACTGTAAAGAACAACAGTTGCACTCCCAAGAAGGAAACTGTGAAGGATAACAGCTGCACTCCCAAGAAGGAAACTGTAAAGAACAACAGCTGCGCTCCCAAGAAGGAAAAGAAATGCGCTAATGTGCATTCTCCAAGCAATGTTGTGGTTGAAAAGTCCACTGTGGAGGATCTACCACCTGGATGGATTAAAGAAGTAAAGATTAGGAAGAGCAGCAATGGCATTAAGAAAGATCCGTTTTATAAAGATCCAGTGAGTGGATATGTATTCCGTTCCAAGAAGGATGTAATGCGCTATCTTGAATCTGGAGATATAGGTAAATGTGCGTTTAAACCAAGTAGAAGACAAATCCAAGATGAAGACAACTTAACTCCATCACCTGCTGCCAAGAGACAGAAGCTGAAGCAATCTGCACCCAAGCAACAGCTTTTTGTTGCCAAAGAATTGCCAGATGATGATAACTCAAGGAAAGGGCAAGATGTGAATGTGCCATCTGGAACGATGGTTGCTCCTGTTCCTACAGGTGAATCTGTTGTAAAGATGCATTCACTAGAGGATGGATCCACAAACCCTCCTGAAATGAAGAAAACAACAGATCCAGGTAGCTCAACACTTTTAAGAAATGAATCCACGAAAGAATCAGAAAAAATGCTCTGTGCAGATGGTGTGCAAGAGAAGGATCATGTTGTGAATATGATTGAGAATGATAATGAAAAGAATCATAGTAACCATAGCATATCCAAAAACATGGAGTTCAATGTGGGTCATCGATTTTCACAGAGACTTGCTGGGAGTGAACCTGTCCTGTTAGCCAACAATGTGATCAATGAACAGACTCTTCAAGTTCCAAAAAGAAACTTGAGGAAAAATAGAACCACTCTAGATGCTGATATGGAAAACAAATCATCTCAGCATTTCAATGGTGTCCCAGAGATTGATCGTGTTCATAAAATGCAACAAGAGGTAATGAACACAAGCAACAATCTTTCTGAAGACCAAATAGTGTTCAAAGAACAACTACGTCAGCTAGAAGAAGACCATAAGCCAGAAATTCGTACTAACTCAAGCAAATCCAGTAATAAGAAAGAGCACAACATTCCTCGTCGGGCTTCAAAACGACTAGCTGGATTTGAACATGAGCCGATGAACTCCATATCCTGTGAAAAAGCTCCCAAATATAAAAGCAAAAGGTCTGAAGATGAAGTCAAAGCAGAATTGCAGCAAAGTGAGGGTGCGCCGGTTACAGAGATTGCAGATCATGCAACAATAAATAGAGAGTCAGGAAATAAAAGAAGAAAATCTCCTAAAATCCCACCTATTGCAGACAATCAACTGAAGAAACTTGAAGATGGAGAAATGGATGATAAGAAATCAGAACCTCAGCTGTCCTTTGCATTCCACTACTCTTGGTCTGACCCATGCTTGGAATTTGCAATCAATACTCTCACAGGTGTGTTACCACCAGAGGATTCAGTTGATAATGGGCCCATTACAGTCCCTGAAACTGATATTCAGAAAACTTTGGTTGACAACATTACAGGAAGAAGCAGGGACAGTCAAAGCAATTCATTTGACAAAGTTACGGGAAGCAGGGACAAAAACTCAGTGGTACGTTCAAATAAATCCAAGAGAAAAAAAGAGCTAAAAGTGCCTATGCGGTTGTCAAAGCGACTTGCTGGCCTTGAACCCGAGGTACCACCTTCTGAAAGAGCTATTGAATATTCCACTAGGAAATCATGCAAAGAAGAACCAACCGCGACTGCAACTGGAATTTCAACAAATGAAGCATCTGACCATCTTGATGCTGGGGAAGAAATCAAGCCTGCTCTTCGTGCATCTGACAGTTTGACAACAGAAGTACTAGGAGAATCTTCAAACAAGAGTGAGAAGTCATATGATGGCCAAACTGTTCCCAAGGAACAACTGCAGAAAGTTGAAGTTGAAAATATTGGTGATGAGAGATCAGGGCCACATCTCCCCTTACTGTTTGGGGACTCTTGGTCGGACCCATGCCTAGAATTTGCAATCAAGACTCTCACTGGTGCTTTGCCAGTTGATGCTGCTGTGGACATTTTGCCTGTTATGACTCCTGATGTTGATGACCTGCCAAATAAGGAATTGCATGGGAGAGTGGTGACGAGCATCAATGGAGAAGCTCAAGATAAATCAAACCAATCCCAGGACAAGAAAGAGCTTAATATGGATGGCCAGCCTTCCGAACTACTCCTGGGGCAACCTGAGTTGAGGACCAGCTCAACATCTTGTGAAAATGCTCCTAAACTTACAACTAGAGAGTCTCATAGTGATGAAGGCAACATAATGAGGAATTTGGATGGAGAACCTCTACATATTGAATCTGGAAATGTAACACAACTAGTGCATCATTCTAGAAATATAAACACGGTATTACATGAAGAGCCATTGAAGGAAAATGGACAGGTTGTTGAGGGTGAGTTTGGTACAACAGAGCGACCACCCCTTCAAACTGAAACGTTAAACCATGATAATACTGAATTACAGTTTTGTAACTCGTTTATGAATTCTTGGTCAGACCCATGCCTTGAATTTGCATTTAAGACTCTTACAGGGGTGATACCAGTAGAGGAAAATTTAGCTATTCAAGGATGTTTTCAGGAACCTGCTAACTGTCATGAACGAAGGGATGCTGGCTCAATGTTGCCGGATTTTGGATCTCCCAGCTTTTCTCCAAGTGATATCTCATTTCACTATGATATAGGAGTGAAATCCATGCCTGAGCAGCAGTCATCAACGAGCTCTTCATTCCTATCCTTGGAAAAAGCGAGCCTGCAAGGTTGCCCTGGAGTTGATCCTCAAAAACACTATTTTCAGCACAATCAAAATTTTCAAAGAAGGTAA 3180 0.4142 MGKPDDEKSEATDREIDSNTKCISKQQIVEKANERPEWLPNGWNVEIRTRKSGSQMGSGYKCYIDPLNGYKFYSKPEVLRFLETVKDNSCTPKKETVKDNSTVKNNSCTPKKETVKDNSCTPKKETVKNNSCAPKKEKKCANVHSPSNVVVEKSTVEDLPPGWIKEVKIRKSSNGIKKDPFYKDPVSGYVFRSKKDVMRYLESGDIGKCAFKPSRRQIQDEDNLTPSPAAKRQKLKQSAPKQQLFVAKELPDDDNSRKGQDVNVPSGTMVAPVPTGESVVKMHSLEDGSTNPPEMKKTTDPGSSTLLRNESTKESEKMLCADGVQEKDHVVNMIENDNEKNHSNHSISKNMEFNVGHRFSQRLAGSEPVLLANNVINEQTLQVPKRNLRKNRTTLDADMENKSSQHFNGVPEIDRVHKMQQEVMNTSNNLSEDQIVFKEQLRQLEEDHKPEIRTNSSKSSNKKEHNIPRRASKRLAGFEHEPMNSISCEKAPKYKSKRSEDEVKAELQQSEGAPVTEIADHATINRESGNKRRKSPKIPPIADNQLKKLEDGEMDDKKSEPQLSFAFHYSWSDPCLEFAINTLTGVLPPEDSVDNGPITVPETDIQKTLVDNITGRSRDSQSNSFDKVTGSRDKNSVVRSNKSKRKKELKVPMRLSKRLAGLEPEVPPSERAIEYSTRKSCKEEPTATATGISTNEASDHLDAGEEIKPALRASDSLTTEVLGESSNKSEKSYDGQTVPKEQLQKVEVENIGDERSGPHLPLLFGDSWSDPCLEFAIKTLTGALPVDAAVDILPVMTPDVDDLPNKELHGRVVTSINGEAQDKSNQSQDKKELNMDGQPSELLLGQPELRTSSTSCENAPKLTTRESHSDEGNIMRNLDGEPLHIESGNVTQLVHHSRNINTVLHEEPLKENGQVVEGEFGTTERPPLQTETLNHDNTELQFCNSFMNSWSDPCLEFAFKTLTGVIPVEENLAIQGCFQEPANCHERRDAGSMLPDFGSPSFSPSDISFHYDIGVKSMPEQQSSTSSSFLSLEKASLQGCPGVDPQKHYFQHNQNFQRR* 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00590 1059 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 29 102 IPR001739 GO:0003677
Rops2g00590 1059 MobiDBLite consensus disorder prediction 1 20 - -
Rops2g00590 1059 SUPERFAMILY DNA-binding domain 34 92 IPR016177 GO:0003677
Rops2g00590 1059 MobiDBLite consensus disorder prediction 718 739 - -
Rops2g00590 1059 MobiDBLite consensus disorder prediction 675 741 - -
Rops2g00590 1059 CDD MBD 159 203 - -
Rops2g00590 1059 PANTHER OS04G0193200 PROTEIN 431 593 IPR038945 -
Rops2g00590 1059 MobiDBLite consensus disorder prediction 291 309 - -
Rops2g00590 1059 MobiDBLite consensus disorder prediction 444 477 - -
Rops2g00590 1059 MobiDBLite consensus disorder prediction 863 877 - -
Rops2g00590 1059 MobiDBLite consensus disorder prediction 524 557 - -
Rops2g00590 1059 MobiDBLite consensus disorder prediction 845 862 - -
Rops2g00590 1059 MobiDBLite consensus disorder prediction 444 557 - -
Rops2g00590 1059 MobiDBLite consensus disorder prediction 213 315 - -
Rops2g00590 1059 MobiDBLite consensus disorder prediction 101 115 - -
Rops2g00590 1059 Gene3D - 120 248 - -
Rops2g00590 1059 MobiDBLite consensus disorder prediction 220 240 - -
Rops2g00590 1059 MobiDBLite consensus disorder prediction 95 129 - -
Rops2g00590 1059 MobiDBLite consensus disorder prediction 613 650 - -
Rops2g00590 1059 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 149 216 IPR001739 GO:0003677
Rops2g00590 1059 MobiDBLite consensus disorder prediction 491 507 - -
Rops2g00590 1059 MobiDBLite consensus disorder prediction 613 636 - -
Rops2g00590 1059 SUPERFAMILY DNA-binding domain 158 206 IPR016177 GO:0003677
Rops2g00590 1059 MobiDBLite consensus disorder prediction 845 880 - -
Rops2g00590 1059 Gene3D - 18 112 - -
Rops2g00590 1059 Pfam Methyl-CpG binding domain 31 87 IPR001739 GO:0003677
Rops2g00590 1059 Pfam Methyl-CpG binding domain 159 204 IPR001739 GO:0003677
Rops2g00590 1059 MobiDBLite consensus disorder prediction 682 697 - -
Rops2g00590 1059 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00590 Rops-Chr2 8463372 8471466 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00590 - - aprc:113854032 1346.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00590 2 8463372 8471466 Rops2g00590 2 8463372 8471466 ECH
Rops1g02170 1 43238140 43238583 Rops2g00590 2 8463372 8471466 PCT