Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00576 ATGGAGGAAGCTCCAGTTTCAGTTTCGAGTACTGCAACTGCATCATGCTGGAGCAGCGTGGTGAAGAAGGAACCACCTCAACAACAGTCCCTTCCCGTGCCAGTTTTGGAGGACACCCGTAACGGCGTCTCCCTCGCCGTTATCGACGCTAACGCCGTCATCGAAGCCGGCAACAACCTTCACGGCTTCGCCGACAAGTTCGTCACCGTCCCTGAAGTCATGGAGGAAATCCGTGACCCTGTCTCACGCCACAAACTCTCTTTCCTTCCCTTCACTATCCAAACCATGGAACCCTCCCCTGAATCCATCAACAAAGTTATCAAATTTGCTAGGGCTACTGGTGACCTGCAGACTCTTTCAGATGTTGATATCAAACTCATAGCTCTAACTTATACTTTGGAGGCTCAGATTCATGGAACTAAACATCTCAGGGATGCACCACCTCCTGTAAAAACCGTTAATGTGAAGAGGTTACCGGAGAAGGACATGCCGGGATGGGGTTCGAATGTGCCTAATTTGCAGGAGTGGGAAGCATTAGAACATGAAGCTGAGGACAAGTTGAATTCCTCGAGAATCCTTCCTTTGCAGGACTTGAATTTGAACATTGTTCCCGAAGATGGACTATCTGTAGATGGTTCAGTGGAGCATGCCAGTGAAACTCATTTGGAAATTCAGGAGGGTGGTGAGTATGGTTTGACAAAGCCTAGGAAATATTGGCCTAAGAAAAAGGAGATAAACATTGAAGGGAAGACGATGGTTGCTGATGGAATTGATGCGTCGCAAGGACAATTTGATGACAATGCTGGTGATTGGATGCCTGCTGTCAGTCGAAGTACTCATAGGAGATATCTGAGAAGGAAAGCTAGACGGGAGTACCATGAGGCATTATCCAGTAATCAAGATGAGAAAGACTTGGAAGAAAACGTTGACGATGGTGTTAGTGAACATGGTAGAGTTGCAGATCAGCTTGTTCATCAAAATGACGGAGAAAAAAATATTGAAGATGTTGTTTCCCAGGATGATCAGATAATAGCAGAGGAAAAAGACAATGAAAATCTCTCTGCAAGTCTGCAGCAAATGAGGCTGGAAGAAGGTTCACTTGAAGTTCTCGATGAAGAACACAAACCAAGTTTGTCTTCTGAAGCACTCCAGTCAAACAATGCTAGACTGCTGGAAACCACGTCTGATGACAACTCAACCAGGGCCACTAAACCATGTGAGACAGATGCAGTCAATGACCAATCAAATCACTCAGAGTGTGCAAGCCAAACCAGTGAAGCTGCTGATTTTTCATATGCCGATGATGATATTAGTGAGCAAAGTTGGATGCTTAGATCTTTGTCTGAGTCAAGTGTAGCTTGCGTAACTGGTGACTTTGCAATGCAAAATGTTCTTCTCCAATTGGGTTTGCGCTTGGTGGCACCAGGAGGATCACAGATACACCAGCTGCATAGATGGATACTCAAGTGTCATGCCTGCTACACTGTTACTGCTGAAATTGGAAGGATATTTTGTCCAAAATGTGGAAATGGTGGTACCTTAAGGAAGGTAGCTGTCACTGTTAATGAAAATGGAATAATGTTAGCATCCCGTCGACCACGAGTTACATTACGTGGCACAAAGTTTTCGTTGCCCTTACCCCATGGTGGAAGGGATGCAGTCACAAAGAACCTCATTCTCCGTGAAGATCAACTTCCTCAAAGGGTACTTCATCCTAAGACGAAGAAGAAAGCCAACAAGCAGGACGATGACTTCTTTACACCGGACAATGTCTTCAGCCACCACACAGATAAGAAAGCTCCTTTACAGCCTCCCATCAGGAAAGCATTACAAGTTTACAGTGGGAAGAGAAATCCAAATGACAATCACTACTCTCGCTCTAAGCATAAGTAG 1893 0.4522 MEEAPVSVSSTATASCWSSVVKKEPPQQQSLPVPVLEDTRNGVSLAVIDANAVIEAGNNLHGFADKFVTVPEVMEEIRDPVSRHKLSFLPFTIQTMEPSPESINKVIKFARATGDLQTLSDVDIKLIALTYTLEAQIHGTKHLRDAPPPVKTVNVKRLPEKDMPGWGSNVPNLQEWEALEHEAEDKLNSSRILPLQDLNLNIVPEDGLSVDGSVEHASETHLEIQEGGEYGLTKPRKYWPKKKEINIEGKTMVADGIDASQGQFDDNAGDWMPAVSRSTHRRYLRRKARREYHEALSSNQDEKDLEENVDDGVSEHGRVADQLVHQNDGEKNIEDVVSQDDQIIAEEKDNENLSASLQQMRLEEGSLEVLDEEHKPSLSSEALQSNNARLLETTSDDNSTRATKPCETDAVNDQSNHSECASQTSEAADFSYADDDISEQSWMLRSLSESSVACVTGDFAMQNVLLQLGLRLVAPGGSQIHQLHRWILKCHACYTVTAEIGRIFCPKCGNGGTLRKVAVTVNENGIMLASRRPRVTLRGTKFSLPLPHGGRDAVTKNLILREDQLPQRVLHPKTKKKANKQDDDFFTPDNVFSHHTDKKAPLQPPIRKALQVYSGKRNPNDNHYSRSKHK* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00576 630 Coils Coil 343 363 - -
Rops2g00576 630 MobiDBLite consensus disorder prediction 572 606 - -
Rops2g00576 630 Pfam PIN domain of ribonuclease 47 133 IPR033411 -
Rops2g00576 630 CDD PIN_Nob1-like 47 158 IPR033411 -
Rops2g00576 630 MobiDBLite consensus disorder prediction 611 630 - -
Rops2g00576 630 Gene3D - 474 548 IPR036283 -
Rops2g00576 630 PANTHER RNA-BINDING PROTEIN NOB1 38 628 IPR039907 -
Rops2g00576 630 Pfam Nin one binding (NOB1) Zn-ribbon like 480 550 IPR014881 -
Rops2g00576 630 SUPERFAMILY NOB1 zinc finger-like 480 543 IPR036283 -
Rops2g00576 630 FunFam 20S-pre-rRNA D-site endonuclease NOB1 37 157 - -
Rops2g00576 630 MobiDBLite consensus disorder prediction 572 602 - -
Rops2g00576 630 MobiDBLite consensus disorder prediction 392 425 - -
Rops2g00576 630 PIRSF Nob1 28 630 IPR017117 GO:0000469|GO:0004521|GO:0042274
Rops2g00576 630 Gene3D - 36 152 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00576 K11883 - gmx:100785714 949.118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00576 2 8308663 8309028 Rops2g00576 2 8308663 8309028 ECH