Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00563 ATGGTTGAATCAATTTCTGCAACTTCAATCCTTGGCCACCTTCCTGTTTGTGGAGGAAATTTATTCAGGGATGTATCTGGTAAAAGGAAATCTTTGAACACTTGTAGGTTCCCAACAACCGAGTTTCTTGGTGGAAGGATTGTTGTTTCTCAGCCTTTGCTCAAATCCAAACAAGATGGCTTCTTGTCATCATCAATTAACGCACTGGCTGTGGAGCTCACAAGAGAAGCATATTCTTACAGGGAAGACAAAATGCCCAAGAAAGATAATAAGATTGACAGTGGCTTTGATCCAAAACCTGGTTTGTGGCCTCCAGCAAATAGAGCAGATAACCCTTCTCTTCGGAATCCTTTGCTTCGTCAAGAGAGGATGGGATGTGGCTGGTTGGGTGCTATATTTGAGTGGGAAGGGGTTCTCATTGAGGATAACCCTGATCTAGAGAAGCAAGCTTGGCTAGCACTGTCTCAAGAAGAAGGAAAATCCCCTCCTCCTACTTTCATCCTGAAGAGAATAGAAGGAATGAAAAATGAACAGGCTATTTCTGAAGTGTTGTGCTGGTCAAGGGACCCTGCACAGTTAAGAAGAATGGCTAATAGAAAGGAAGAAATCTACCAAGCTTTGCAAGGTGGGATATATAGTCTCATGCCTGGGTCCAAAGAGTTTGTGAGTGTTTTGATGCATTATAAGATACCAATGGCATTGGTTTCCACACGTCCTAGAAAGATTCTTGAGATTGCTATTGGGGAAATCGGTATTGAAGACCATTTCAGTGTCGTTGTAGCTGCTGAGGATGTTCACAGGGGAAAGCCTGATCCAGAAATGTTTATGTACGCAGGCCAGCTTTTGAACTTCATACCTGAGAGGTGCATTGTGTTTGGAAACTCAAATCAAACAGTGGAGGCTGCACATGATGCACGGATGAAGTGTGTAGCTGTTGCTAGCAAGCATCCTGTGTATGAGCTTGGGGCTGCAGACTTAGTTGTTAAGCGCCTGGATGAGCTTTCAGTGGTTGATTTGAAGAATCTGGCAGACATTGAATCAGCTGAATTTGGGTCTGGGGAGCCTGAGGTTGAGATGGAGGTGGAAAGAGATTCTGATACTTCATCTGTTGATGACAGTTTCTGGTAA 1128 0.4379 MVESISATSILGHLPVCGGNLFRDVSGKRKSLNTCRFPTTEFLGGRIVVSQPLLKSKQDGFLSSSINALAVELTREAYSYREDKMPKKDNKIDSGFDPKPGLWPPANRADNPSLRNPLLRQERMGCGWLGAIFEWEGVLIEDNPDLEKQAWLALSQEEGKSPPPTFILKRIEGMKNEQAISEVLCWSRDPAQLRRMANRKEEIYQALQGGIYSLMPGSKEFVSVLMHYKIPMALVSTRPRKILEIAIGEIGIEDHFSVVVAAEDVHRGKPDPEMFMYAGQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVKRLDELSVVDLKNLADIESAEFGSGEPEVEMEVERDSDTSSVDDSFW* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00563 375 Gene3D Putative phosphatase; domain 2 141 214 IPR023198 -
Rops2g00563 375 CDD HAD_BPGM-like 191 314 - -
Rops2g00563 375 NCBIfam HAD-IA family hydrolase 200 312 IPR006439 -
Rops2g00563 375 MobiDBLite consensus disorder prediction 86 109 - -
Rops2g00563 375 Gene3D - 131 329 IPR023214 -
Rops2g00563 375 PANTHER 5-AMINO-6-(5-PHOSPHO-D-RIBITYLAMINO)URACIL PHOSPHATASE, CHLOROPLASTIC 1 375 - -
Rops2g00563 375 Pfam Haloacid dehalogenase-like hydrolase 143 312 IPR041492 -
Rops2g00563 375 SUPERFAMILY HAD-like 131 334 IPR036412 -
Rops2g00563 375 MobiDBLite consensus disorder prediction 351 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00563 Rops-Chr2 8165339 8167203 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00563 K22912 - gmx:100798181 629.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00563 2 8165339 8167203 Rops2g00563 2 8165339 8167203 ECH