Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00561 ATGGTGAATCGACGGTTCACTCAGGTAGCAACCAGCGACGACGAAGATGAAGCGTCACTGCCTCGTCCGAAGCAGCAACAATTTGGGTCAAGCGCCTCCGAAGAGAACCGTTCGAAGCAGCGGAAGAGGAAGAGAATGAAGCTCCAAGATGAAGATGACGAAGTGGATGAGAAGGAGGAGGAAGAGGACAAGAAAAAGAAGAGAAAGCCGAAAGAGAAGGAAGAGAATTCGTCTAACGAAGAAGAAGACGAAACGCCACTGGAGGATGCCAAGCCTATTGGTGAAGCAGTTAGGGTTTCTGGAAAAGGAAGAGGAAGGAGGAGGCATTTTAACTCCTTCGAGTTCGATGGAAACCAATACACACTGGAGGACCCTGTACTTCTTGTGCCTGAGGACAAAGAGCAAAAGCCCTATGTGGCAATTATTAAGGACATTACACAATCCCAAAGTGGCAGCATGATGGTCACAGGGCAGTGGTTTTATCGTCCTGAAGAAGCAGAAAGAAAAGGTGGTGGCAGCTGGCAATCACGTGATACAAGGGAGCTGTTTTATAGTTTCCACCGTGATGAGGTTCCTGCAGAGTCTGTTATGCACAAGTGTGTGGTGCATTTTGTTCCCATACACAAACAGCTTCCGAACCGTAAGCAGCACCCAGGGTTCATTGTGCAAAAGGTGTATGACACTGTTGAAAGGAAACTCTGGAAGCTAACTGATAAGGACTATGAGGACAATAAACAGCAAGAAATCGACGAGCTTGTTCAGAAAACTCTTAAACGTTTGGGTGAACTACCTGACATCGAGACCGATGAAGCTCTTGCTGATCAGGAAGATGCGATGAAAAATAAAAGAATCTCAAGGAAAAAGAGCATTTCGCCTCTTGATATTTCAAGGGAGGAGGAAACAGCTCGAAAGAGTGATCAACCTCTGAAACCTGAAACGCCAGGGAGTTGTGTAAATAATACCTCAGAGCATTATCGCATATTAGTGGATTTCAATGCACTAACAGGAGATACCCATCGTGACAGATGTTTGGAGAAGTTGCTTCAAAGTGTTCAATACATGTTTGATACTAATGACAGCATAAAAAAGGAAGACAAAGGAAATGACAATTCTGATGCAATCAACAATGGAAGCAATAACAAAAGTTTAGAATTAGCAAATGAAAATAAAGACAAGGTTCAGAAGAGTTCCAAGTCTTTCATCTGGCCAGATGTTGCTGTTCCAGCTGTAGTTGCTCTGGAAAAAGCTTCACATGATACCCTTTCGTCAGATTATCAGAAGTACAACCAAAAGCTACGGCAATTAATATTTAATCTCAAGAACAATGCATTGCTAGCACGCCGTCTATTAAATGGAGAGTTGGAGCCTTCTAAAATTTTGAATATGACTCCCAATGAATTGAAGGAGGGTTTGACTGCTGAGGAAATATCCAAGGAAGAGCCCGATGAGTCACAACACATGCAGATGACGGATGCCCGCTGTTCAATTTGCACGGAGCGTAAGGTGGGCTTGAGGGATATTATCCACGCAGGACATGTTGACCGATATAAGCTGGAATGTATTGCCTGTGGTAATTCCTGGTATGCCTCCCGTGATGAGGTGTCCGCGCTGACTATAGATGCATCAGATTCAAAAAGAAGTGTAGGTACGGCACCATGGGCCACTGCAAAATTTGAAGATGTTGAGAAAAAGTTGGTGAGTCCCCGTGAATCTGATAAGTTGGCCAATGACATATTTAAGAAAACAAGTGAAGCATATATGCCTGTTTTGGATACCCAGAAATCATTCAAGTCCAGGAAAGATGAGAACATTGAAGCTTCAAGACATGCTGACTAG 1836 0.4374 MVNRRFTQVATSDDEDEASLPRPKQQQFGSSASEENRSKQRKRKRMKLQDEDDEVDEKEEEEDKKKKRKPKEKEENSSNEEEDETPLEDAKPIGEAVRVSGKGRGRRRHFNSFEFDGNQYTLEDPVLLVPEDKEQKPYVAIIKDITQSQSGSMMVTGQWFYRPEEAERKGGGSWQSRDTRELFYSFHRDEVPAESVMHKCVVHFVPIHKQLPNRKQHPGFIVQKVYDTVERKLWKLTDKDYEDNKQQEIDELVQKTLKRLGELPDIETDEALADQEDAMKNKRISRKKSISPLDISREEETARKSDQPLKPETPGSCVNNTSEHYRILVDFNALTGDTHRDRCLEKLLQSVQYMFDTNDSIKKEDKGNDNSDAINNGSNNKSLELANENKDKVQKSSKSFIWPDVAVPAVVALEKASHDTLSSDYQKYNQKLRQLIFNLKNNALLARRLLNGELEPSKILNMTPNELKEGLTAEEISKEEPDESQHMQMTDARCSICTERKVGLRDIIHAGHVDRYKLECIACGNSWYASRDEVSALTIDASDSKRSVGTAPWATAKFEDVEKKLVSPRESDKLANDIFKKTSEAYMPVLDTQKSFKSRKDENIEASRHAD* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00561 611 ProSiteProfiles BAH domain profile. 118 237 IPR001025 GO:0003682
Rops2g00561 611 Pfam BAH domain 119 235 IPR001025 GO:0003682
Rops2g00561 611 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 606 - -
Rops2g00561 611 MobiDBLite consensus disorder prediction 592 611 - -
Rops2g00561 611 SUPERFAMILY Elongation factor TFIIS domain 2 334 468 IPR036575 GO:0006351
Rops2g00561 611 Gene3D - 3 226 IPR043151 -
Rops2g00561 611 MobiDBLite consensus disorder prediction 361 390 - -
Rops2g00561 611 CDD BAH_plant_3 100 246 - -
Rops2g00561 611 MobiDBLite consensus disorder prediction 35 52 - -
Rops2g00561 611 MobiDBLite consensus disorder prediction 1 102 - -
Rops2g00561 611 ProSiteProfiles TFIIS central domain profile. 339 495 IPR003618 GO:0006351
Rops2g00561 611 Pfam Transcription factor S-II (TFIIS), central domain 335 486 IPR003618 GO:0006351
Rops2g00561 611 Gene3D - 319 469 IPR036575 GO:0006351
Rops2g00561 611 SMART mid_6 372 477 IPR003618 GO:0006351
Rops2g00561 611 MobiDBLite consensus disorder prediction 60 76 - -
Rops2g00561 611 MobiDBLite consensus disorder prediction 277 319 - -
Rops2g00561 611 SMART BAH_4 118 237 IPR001025 GO:0003682
Rops2g00561 611 Coils Coil 41 75 - -
Rops2g00561 611 MobiDBLite consensus disorder prediction 594 611 - -
Rops2g00561 611 MobiDBLite consensus disorder prediction 277 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00561 Rops-Chr2 8145696 8151298 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00561 - - gmx:100787670 956.822
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00561 2 8145696 8151298 Rops2g00561 2 8145696 8151298 ECH