Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00560 ATGTTTCTTCTCTCTGTTTCTAACATCGCTTTTTGGCACCATTTGCTTTACTGCTTCTTCTGTAGTGCTAGTTTACTTCTCCAAGATCTACTCCAGCCTCTGGATTCATCAATGGGACAAGAGTTGGAGTTGGATCTCAATGACAAGTCTTCAGAGGGTCTGAGTCCAAATACTGTCCTTCCATCTCATCAGTATTGTGTGAATGTGAAGAAGAGATCTAAAAAGGGAAAACCCACAGGGAAAGATGAATTTTTTACCCTCAAGGGGGACTTTGCAGAGATAAAATTTGCTCGTTTCCGCAGTTCTTCATGTAAGAGCCTTCTCTCTAGACCTCATGGATTGGAAGGTAACATAGAAACCAGGCAGGGTTCCACGTATCAGAGTTCAGAGGAAGTAAAATATATAAAGAAAATGGGCACAGTAGTAGGGGGAAGGCAAAAAATAGAAATTTCAAGGAGGAGTGTCTCTTTCTCAGGTAGCATTGTTGATTCTATATGTGGTTCAGATGAAGGTTCCATGCAGAGATCTTCAGATATATCTCGGGATTCAAATTTGGGTTCCCCATATGTTTCCAGGTCATGGGCTTGCAAGGAGCCAGATTCTCCAAAGGGCTTTATTGAAATTTGTATGCATTCAGATGTTAAGAATAAAAACTCTACTGCAGTAGAAGGGAGAGATTCTATAAATTTTAAGTCCAGAAGTGATAAAGTCACTGGTTCTCTGATTAATGGCAAATCTCTTCTTGAAAAGGACAATGCCCACTCATTGCAAAAGTCGCACTCTGTTAAGGTGGAAGTCTCTCACTTGCTATCTCCAGTGGAAAGTGATTGCTCATCAAGATCAAGTCCAAAAGTCCAATTAACCCCTGTCAGGAAAAGGATGAATCATTTCACAAAGTCAAAATCTTTGAGAAGTCCACTGAGTCATATACTGGAAACTAACGAGGTCAAATCAAATGAGACAGCAAAAGTTACAAGGAACAGGAATTATCAGAAATATTTGCTAAATGACTTATCTAACACAGGAAAGCATTCTGACATTATTTCTGAGTTTATCAACCGAGAAATCCAGTGTTCAGGTATAGCATCTTCACCAGTTCACCTGCATGGTATTCTAAAGTTGGAAAACAAACATGGAGTGCCTTTTTTTGAGTTTAAGGTAAAGTGCCCTGAAGAGGTGTTTGTGGCCAAGACATTGAGAGTAGGTAATGCTTTCAATTGGGTATATACCTTTCACTCCATTGATAATAGAAAGAAGAGCAATGCCACTGGGTTGGAATCCCTTGATTTTGACAAAGATTTCTCAGTAGTAGCACAGATGCTAGTTTCCAGTAATTTATGTTCTGAACTAGAAGACAGAGTATTTGACAACTCTATGGTGACAGAATTTGTGTTGTATGATCTTACACACTCAAGACATAGTGTTTTGTCTGAAAAAAAGTCTTTCTGTGAACAAGATGATTTTAAAACTCCAAAAGCTTCCCATGTTGGATTGAAGGAAGAAACTTCTGAGCTGGATGAAGAGAACCTTGCAATAAAAAATGAACTTCAAGACAAGCCTCTATCAAGCAATGTTGAATTTGATGATTCAAATTCTTATCCTTTGTTGCCCACCAAATCCTATTCAAACCTCGAAATTGCTGCCATTGTCTTGCAAATTCCATTTTCGAAGAGAGAAAGCTTGAAGTACAAGAGAGGGGATATACTAAGTGCTAAAGAGTATTCCAATATAGGTGATCTCTCTGCAGTAGAAAATCTGAGTAGAAAGAGTCTTCATGACAGCAAAATCCAGGAACAAGTGAAGGTGGTAATACCAACTGGCAACCATGGTTTGCCAAATGCTGAAAGCCGGGGTCCCTCATCATTACTTGATCGATTGAGACATGGTGGAGGTTGTGACTGTGGTGGCTGGGACATGGCCTGTCCCCTTATACTTTTGGGCAATCCTAATATTCAATTTGCTGAAGATCACTCACTTATGGAGGATCATCAACCTCTGGAACTTCTTGTTCAGGGAGCAAAAGAAACTAGTCCAACCTTCAGCATGACGATGATTGAAGAGGGGCAATATGCTGTTGATTTTCATGCGCAATTATCCACATTACAAGCATTCTCCATCTGTGTTGCCATTTTGCATGGCACTTCTGCCTTCAGTGGTGCAGGACATGAGAAAAACCAGCAGTTATCTCAATGCAGTTCACTGAAAATGCTCATTGAGGAGGAAGTAGAGGATTTTTTCAACTCAGTCACAACCGAGAAGAAGGTGAGCAAGACTCAGAAAAGAATTCCTCGATCCTATGTGCTGAACCCACCTTTTTCACCCATTGCACGAGTATAA 2337 0.4005 MFLLSVSNIAFWHHLLYCFFCSASLLLQDLLQPLDSSMGQELELDLNDKSSEGLSPNTVLPSHQYCVNVKKRSKKGKPTGKDEFFTLKGDFAEIKFARFRSSSCKSLLSRPHGLEGNIETRQGSTYQSSEEVKYIKKMGTVVGGRQKIEISRRSVSFSGSIVDSICGSDEGSMQRSSDISRDSNLGSPYVSRSWACKEPDSPKGFIEICMHSDVKNKNSTAVEGRDSINFKSRSDKVTGSLINGKSLLEKDNAHSLQKSHSVKVEVSHLLSPVESDCSSRSSPKVQLTPVRKRMNHFTKSKSLRSPLSHILETNEVKSNETAKVTRNRNYQKYLLNDLSNTGKHSDIISEFINREIQCSGIASSPVHLHGILKLENKHGVPFFEFKVKCPEEVFVAKTLRVGNAFNWVYTFHSIDNRKKSNATGLESLDFDKDFSVVAQMLVSSNLCSELEDRVFDNSMVTEFVLYDLTHSRHSVLSEKKSFCEQDDFKTPKASHVGLKEETSELDEENLAIKNELQDKPLSSNVEFDDSNSYPLLPTKSYSNLEIAAIVLQIPFSKRESLKYKRGDILSAKEYSNIGDLSAVENLSRKSLHDSKIQEQVKVVIPTGNHGLPNAESRGPSSLLDRLRHGGGCDCGGWDMACPLILLGNPNIQFAEDHSLMEDHQPLELLVQGAKETSPTFSMTMIEEGQYAVDFHAQLSTLQAFSICVAILHGTSAFSGAGHEKNQQLSQCSSLKMLIEEEVEDFFNSVTTEKKVSKTQKRIPRSYVLNPPFSPIARV* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00560 778 Pfam Domain of unknown function (DUF3527) 365 713 IPR021916 -
Rops2g00560 778 PANTHER EXPRESSED PROTEIN 43 778 - -
Rops2g00560 778 Coils Coil 498 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00560 Rops-Chr2 8139554 8143956 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00560 - - cam:101501082 1108.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00560 2 8139554 8143956 Rops2g00560 2 8139554 8143956 ECH