Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00549 ATGGCGCGAAGTCAGCAAGGCTCTATCGCCGCCATAGAGAACCCCACTTCGAAATTCTATGGCCTACAATACCACCCGGAGGTGACACATACGCCGGAAGGAATGGATTTGTTGCGGCATTTTCTGTTTAATGTTTGTGGGGTTGAAGCAGGGTGGAAGATGGAGGATGTTATGGAGGAAGAGATAAAAGTGATCAAAGATACGGTGGGCCCTGAGGAACATGTAATTTGTGCCTTGTCTGGTGGTGTTGATTCCACTGTTGCTGCTACTCTTGTCCATAAAGCCATTGGTGATAGGCTTCATTGTGTTTTTGTTGACAATGGGTTGCTCAGGTATAAGGAGAGGGAACGTGTGATGGAAACCTTTGAAAAGGATCTTCATTTACCGGTTGTATGTGTTGATGCTGTGAATCAATTTCTTACTAAGCTGAAGGGTGTTACGGATCCTGAGATAAAGAGGAAGATTATTGGAAAAGAGTTTATATGTATCTTTGATGCTTTTGCTCAGGATTTGGAGCAGAAATTTGGAAAGAAACCTTCTTACTTGGTTCAAGGGACTTTGTACCCTGATGTGATTGAGTCCTGCCCACCTCCTGGAAGTGGGAGAACCCATTCTCATACCATCAAGAGTCATCATAATGTTGGGGGTCTTCCAAAGGACATGAAGTTGAAACTTATTGAACCACTTAAACTTCTATTCAAGGATGAGGTTCGTCAATTAGGGAAGATCTTGGATGTTCCTGAGGGCTTTCTAAAACGCCATCCATTCCCTGGGCCTGGTCTTGCAGTGAGAGTTTTGGGTGATGTAACTGAAGGAAATGCCTTAGAAATTCTCCGACAGGTTGATGAGATTTTCATTCAGTCAATCAAGGATGCTGGCCTTTATGATTCAATATGGCAAGCCTTTGCAGTTTTCTTGCCAGTAAGATCTGTTGGAGTTCAAGGTGATCAAAGAACACACTCCCATGTTGTTGCTCTCAGAGCTGTTACAAGTCAAGATGGAATGACAGCAGATTGGTACTACTTTGAGCACAAGTTCCTTGATGATGTTGCACGCAAGATCTGTAATGGTGTGCGTGGCGTGAACCGTGTCGTGCAAGACATTACGTCAAAGCCTCCATCAACAATTGAATGGGAATAA 1140 0.4377 MARSQQGSIAAIENPTSKFYGLQYHPEVTHTPEGMDLLRHFLFNVCGVEAGWKMEDVMEEEIKVIKDTVGPEEHVICALSGGVDSTVAATLVHKAIGDRLHCVFVDNGLLRYKERERVMETFEKDLHLPVVCVDAVNQFLTKLKGVTDPEIKRKIIGKEFICIFDAFAQDLEQKFGKKPSYLVQGTLYPDVIESCPPPGSGRTHSHTIKSHHNVGGLPKDMKLKLIEPLKLLFKDEVRQLGKILDVPEGFLKRHPFPGPGLAVRVLGDVTEGNALEILRQVDEIFIQSIKDAGLYDSIWQAFAVFLPVRSVGVQGDQRTHSHVVALRAVTSQDGMTADWYYFEHKFLDDVARKICNGVRGVNRVVQDITSKPPSTIEWE* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00549 379 Pfam tRNA methyl transferase HUP domain 74 122 - -
Rops2g00549 379 FunFam GMP synthase [glutamine-hydrolyzing] 53 263 - -
Rops2g00549 379 PANTHER GMP SYNTHASE-RELATED 1 379 - -
Rops2g00549 379 SUPERFAMILY GMP synthetase C-terminal dimerisation domain 258 379 - -
Rops2g00549 379 CDD GMP_synthase_C 74 378 IPR001674 GO:0003922|GO:0005524|GO:0006164|GO:0006177
Rops2g00549 379 ProSiteProfiles GMP synthetase ATP pyrophosphatase (GMPS ATP-PPase) domain profile. 52 253 IPR025777 GO:0003921|GO:0005524
Rops2g00549 379 Gene3D - 1 50 IPR029062 -
Rops2g00549 379 Pfam GMP synthase C terminal domain 288 378 IPR001674 GO:0003922|GO:0005524|GO:0006164|GO:0006177
Rops2g00549 379 Pfam Glutamine amidotransferase class-I 3 44 IPR017926 -
Rops2g00549 379 Gene3D HUPs 53 263 IPR014729 -
Rops2g00549 379 SUPERFAMILY Class I glutamine amidotransferase-like 2 54 IPR029062 -
Rops2g00549 379 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 1 51 - -
Rops2g00549 379 NCBIfam glutamine-hydrolyzing GMP synthase, C-terminal domain 57 379 IPR001674 GO:0003922|GO:0005524|GO:0006164|GO:0006177
Rops2g00549 379 FunFam GMP synthase [glutamine-hydrolyzing] 264 379 - -
Rops2g00549 379 Gene3D - 264 379 - -
Rops2g00549 379 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 41 272 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00549 K01951 - gmx:100794993 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00549 2 7943304 7946169 Rops2g00549 2 7943304 7946169 ECH