Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00545 ATGGCTTTGCCATTTGTTACTCTTCCACATTTGGTATATGCTACAGCTACATTCAATTCCTTCACTGTAAAACCCCTACGCTTTGGTTTTCGTTCTCTTTCTTATCCATTCGTTGGTGTTCGACCTCCCGGTGCTATCGGAGCCGACGGCAAGTTCTATCCAAACTCCGCCGACGATGACCCGCCGGAGGCACCGGAGGATTCCTCTCACGGCTACTCCAAATTCCAGCAAATCCATATTCAAGCCGATCGAGCTCGCCAACGCGAAGAGGAAGACTTCAAGAACAACCAGTCCACTTACCTCGCCGCCATCGCCGACGTCGAAGACGCACCGGACAATGTTCCCTCTCTCGATGCCGAGGATGATTTGTTCCGAGAAATTGACAAAGCCATCGCCCTCAAACGTAAGGAATTCGTGAAGCAAGGGCTTTTGGAACCCAATCCACCAAAACAAGAACTCGCCGTCGTCGACGATGAGCTTCAACCCAACGAGGTTGCTGACGTGGAAGAAATTGATCAGCTTCAGGGGCTTGCTGTCACTTCCGACGAACAATTCGGAGATTTCGACGGTGAAGAAGATGGAAATCGAGGTTCGTCTTTGAAATCTGAATCTCCGTTTGAGTTGGATTTTGAGAGTTATGGGAAAAGCAAGGCTAGGATTGTGGAACCTAAGTTTAAGATGAGTTTGGCTGAGCTTTTAGATGAGAGCAAGGTTGTTCCTGTGTCTGTGTATGGTGATTTGGAAGTTGAGATTACTGGAATTCAGCATGATTCAAGGCTTGTTACTTCTGGTAATTTGTTTGTGTGTTGTGTTGGGAGAAAAACTGATGGGCATTTGTTCTTGAGTGAGGCCGATAAGAGAGGAGCTGTTGCTGTTGTGGCTAGTAAAGAGATTGATATTGAGGAAACTTTGGGTTGTAAGGCTTTGGTGATTGTGGAAGATACCAATGCTGTTCTTGCTTCATTGGCTGCTTCCTTTTACAGGTACCCTTCTAAAAATATGGCTGTTATTGGGATAACTGGAACATATGGCAAAACAACCACCACTTATTTGATTAAAAGTATGTATGAAGCAATGGGCCTGCGAACTGGGATGTTCAATTCGATTGCGTGTTATGTTCATGGGGAGAATCAGTTGGACTTGCCAACCATGACCCCGGATGTTGTTTTAGTTCAGAATTTGATGGCAAAGATGCTTCACAATGGAACTGAAGCAGTGGTCGTGGAGGCTTCTTCTACTGGACATGATCGGGGAAAGTATGACGAGGTTGATTTTGATATTGCGGTTTTTACTAATTTGGCTGAGGAGGATGATAGAGATGCAAAGGCAAAGTTGTTCTCGAGGATGGTTGATCCTGAGCGGCACAGGAAAGTAGTTAACATTGATGATCCGATTGCGGCTTCCTTCATTTCACTGGGGAACCCAGAAGTTCCTGTTGTGTCATTCGCGCTGGAGAATAAGAACGCGGATGTTCATCCCTTGAAGTTTGAACTCTCCCTTTTTGAGACACAGGTGTTGGTAAATACGCCCACTGGGATACTAGAAATTTCATCAGGTTTACTTGGAAGACATAATGTTTACAACATTCTTGCTGCTGTGGCAGTTGGCATTGCTGTTGGGGCACCCTTAGAGGACATTGTTAGAGGGATTGAAGAGGTTGATGCAGTTCCTGGTAGGTGTGAGTTAATTGATGAGGAACAAGCGTTTGGGGTAATTGTGGACTATGCTCGAACTCCTGATGCATTGTCTAGATTGCTTGATTCCGTAAGAGAGCTTGGACCACGCAGGATTATAACTGTTATCGGTTGCTGTGGTGAGAGTGAAAGGGGGAAGAGACCTGTGATGACCAAGATAGCAACAGATAAAAGTGAAGTGACCATGCTGACATCTGACAATCCCAAGAATGAAGATCCATTGGATATTTTGGATGATATGTTGGTTGGCGTAGGATGGACAATGCAGGACTACCTGAAATATGGAGAGAATGACTACTATCCTCCTCTTCCAAATGGTCATAGGGTTTTTCTCCATGACATAAGGAGGGTAGCTGTTCGAGCTGCAGTTGCAATGGGAGAGGAGGGTGACGTGGTTGTGATTGCGGGCAAAGGCCATGAAACATATCAAATAGAAGGTGATAAGAACGATTTCTTTGATGATCGAGAAGAGTGCCGGGAGGCATTACAGTATGTTGACGAGCTCCACCAAGCTGGAATAGATACAAGTGAATTTCCATGGCGGTTACCAGAGAGCCACTGA 2256 0.4557 MALPFVTLPHLVYATATFNSFTVKPLRFGFRSLSYPFVGVRPPGAIGADGKFYPNSADDDPPEAPEDSSHGYSKFQQIHIQADRARQREEEDFKNNQSTYLAAIADVEDAPDNVPSLDAEDDLFREIDKAIALKRKEFVKQGLLEPNPPKQELAVVDDELQPNEVADVEEIDQLQGLAVTSDEQFGDFDGEEDGNRGSSLKSESPFELDFESYGKSKARIVEPKFKMSLAELLDESKVVPVSVYGDLEVEITGIQHDSRLVTSGNLFVCCVGRKTDGHLFLSEADKRGAVAVVASKEIDIEETLGCKALVIVEDTNAVLASLAASFYRYPSKNMAVIGITGTYGKTTTTYLIKSMYEAMGLRTGMFNSIACYVHGENQLDLPTMTPDVVLVQNLMAKMLHNGTEAVVVEASSTGHDRGKYDEVDFDIAVFTNLAEEDDRDAKAKLFSRMVDPERHRKVVNIDDPIAASFISLGNPEVPVVSFALENKNADVHPLKFELSLFETQVLVNTPTGILEISSGLLGRHNVYNILAAVAVGIAVGAPLEDIVRGIEEVDAVPGRCELIDEEQAFGVIVDYARTPDALSRLLDSVRELGPRRIITVIGCCGESERGKRPVMTKIATDKSEVTMLTSDNPKNEDPLDILDDMLVGVGWTMQDYLKYGENDYYPPLPNGHRVFLHDIRRVAVRAAVAMGEEGDVVVIAGKGHETYQIEGDKNDFFDDREECREALQYVDELHQAGIDTSEFPWRLPESH* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00545 751 MobiDBLite consensus disorder prediction 182 203 - -
Rops2g00545 751 SUPERFAMILY MurD-like peptide ligases, peptide-binding domain 556 728 IPR036615 GO:0009058|GO:0016881
Rops2g00545 751 Pfam Mur ligase middle domain 339 535 IPR013221 GO:0005524|GO:0009058|GO:0016881
Rops2g00545 751 SUPERFAMILY MurD-like peptide ligases, catalytic domain 330 553 IPR036565 GO:0005524|GO:0009058
Rops2g00545 751 NCBIfam UDP-N-acetylmuramyl-tripeptide synthetase 249 728 IPR005761 GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301
Rops2g00545 751 FunFam UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase 561 734 - -
Rops2g00545 751 Hamap UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 227 727 IPR005761 GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301
Rops2g00545 751 PANTHER MUR LIGASE FAMILY MEMBER 174 737 - -
Rops2g00545 751 Pfam Mur ligase family, glutamate ligase domain 556 639 IPR004101 GO:0009058|GO:0016881
Rops2g00545 751 Gene3D - 561 738 IPR036615 GO:0009058|GO:0016881
Rops2g00545 751 Pfam Mur ligase family, catalytic domain 250 327 IPR000713 GO:0009058|GO:0016881
Rops2g00545 751 SUPERFAMILY MurE/MurF N-terminal domain 227 330 IPR035911 -
Rops2g00545 751 MobiDBLite consensus disorder prediction 49 73 - -
Rops2g00545 751 Gene3D - 228 328 - -
Rops2g00545 751 Gene3D - 330 559 IPR036565 GO:0005524|GO:0009058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00545 - - gmx:121174912 1157.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00545 2 7926725 7930794 Rops2g00545 2 7926725 7930794 ECH