Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00539 ATGCCACCTTTTGCAGGTTCTCACCCAGATGGGTTTCTCCAATTCCAAACAAAATCAGATTCAAACATTGTCACCGTTGATGTGGGTGGTCAAGTGTTTCAAACCACAAAACAGACATTAACCTCTGCAGGTCCCAAAAGCTTCTTCTCGAGAATATCAGAAACCTCAACACAATACACCCCTTTTGTTGACAGAGACCCTGAATTGTTTTCCCTTCTTCTCTCTCTCCTCAGAACCGGTAACCTTCCTTCAAAAGCCAAAACCTTTGATCTTCAAGACCTAATCTTGGAGTCCCAATTCTATGGTATTGAAAACCTTCTCGTAAATTCTCTCTCCGACCCTTCTCAATTGGAACCCTTTAACCTCCAAAAATCGTTGCTTTTACCCTTGAACGGACGTGATTCACCCTCCGCCGTCGCCACCACCCCTTACGGCTCCCTCCACGTCGCACACGGAAGCAAGATCACATCTTTTGATTGGTCCCTTCGCCGCAAATCCACCATTCTCACCCATTTCACCGCCGTTGATTCCCTTCTAGCTCTTTCGCCGTCTGTGGCTGCCGCCGGCGCCAACGACTTTTCCGGCCTCCAGATTCTCGATTTGGAAAAGGGGCACGTGAGGGATACCCTAAATTGGGAAAACGTGACTAAATCTGGTTCCACCGTCCAAGCCATCGGTTCCTCGCCGGAGCACATGTTCGTAAGCTTCGAATCTTCCCGGAGAAACTCAAATTCCATTGTGGTTTACGATTTGAATAGCTTGAACCCCGTCACAGAGATCGGTCACAACGAGATTTACGGCGCCGACATCGATTCGGCGATTCCGGCGACGAAGTTGCAATGGGTTAGCGGTTACAACTTGTTGATGGCATCTGGGTCCCACAGTGGTCCTTCCGGGGTGTCAGGTAACGTGAGATTATGGGACGTTCGATCTGGCGAAGTTGTCTGGCAGATGACAGAGAAGGTTGATTGTTTTGCTGACGTGGCAGTTTCTGATTCCTTGTCGGTTATATTCAAGGTTGGTGTGAATTCGGGTGAGGCTTCCTACGTGGATTTGCGTAATTTGAGTGCTGAGAAGACTTCATGGGTTTGCCTTGGTGACAAAAGAAAAGTGCTGAATGGGAAAAGGGAAGGTTTTGGTTCCAAGGTTGTAACTCAAGGGAATCAAGTGTTTTGTACCAAAGGTGGGAATTTGGAGCTTTGGTCAGAGGTTATAATGGGCAATTCAAACACTAAGAGAAGTGGGTTGGAGGAGAGGATCTTCAAGAAGAACTTGATGGGGAGGGTTAAGGACATGGGAGGTGATAGAATTACCAATTTGACCTTTGGAGGGAGCAGGATGTTCTTGACTAGGAAGGATCAGCAATGTGTTGAGGTTTGGCAGAGTTCTTCTAGGGAATTTTGA 1404 0.4751 MPPFAGSHPDGFLQFQTKSDSNIVTVDVGGQVFQTTKQTLTSAGPKSFFSRISETSTQYTPFVDRDPELFSLLLSLLRTGNLPSKAKTFDLQDLILESQFYGIENLLVNSLSDPSQLEPFNLQKSLLLPLNGRDSPSAVATTPYGSLHVAHGSKITSFDWSLRRKSTILTHFTAVDSLLALSPSVAAAGANDFSGLQILDLEKGHVRDTLNWENVTKSGSTVQAIGSSPEHMFVSFESSRRNSNSIVVYDLNSLNPVTEIGHNEIYGADIDSAIPATKLQWVSGYNLLMASGSHSGPSGVSGNVRLWDVRSGEVVWQMTEKVDCFADVAVSDSLSVIFKVGVNSGEASYVDLRNLSAEKTSWVCLGDKRKVLNGKREGFGSKVVTQGNQVFCTKGGNLELWSEVIMGNSNTKRSGLEERIFKKNLMGRVKDMGGDRITNLTFGGSRMFLTRKDQQCVEVWQSSSREF* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00539 467 Pfam BTB/POZ domain 24 109 IPR003131 GO:0051260
Rops2g00539 467 SMART BTB_4 22 118 IPR000210 GO:0005515
Rops2g00539 467 Gene3D Potassium Channel Kv1.1; Chain A 14 118 IPR011333 -
Rops2g00539 467 SUPERFAMILY WD40 repeat-like 124 354 IPR036322 GO:0005515
Rops2g00539 467 Gene3D - 138 467 IPR015943 GO:0005515
Rops2g00539 467 PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER 17 464 IPR045068 -
Rops2g00539 467 SUPERFAMILY POZ domain 21 108 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00539 Rops-Chr2 7839627 7841281 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00539 - - tpra:123915936 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00539 2 7839627 7841281 Rops2g00539 2 7839627 7841281 ECH