Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00534 ATGTCTTCCCCAAGTAAACGCCGAGACATGGATTTGATGAAACTGATGATGAGTGATTATAAAGTGGAGACGATCAATGATGGCATGCAAGAGTTCTTTGTGGAATTCCATGGACCTAAAGACAGTCCTTATCAAGAAGGTGTATGGAAGATAAGAGTGGAGCTACCTGATGCTTATCCTTATAAGTCTCCGTCTATTGGTTTTGTCAACAAAATTTATCATCCTAATGTTGATGGGATGTATGGTTCGGTTTGCTTAGATGTTATTAACCAGACTTGGAGTCCCATGTTTGACCTTGTTAATGTGTTTGAAGTGTTTCTTCCTCAACTTCTTCTGTACCCCAATGCATCTGATCCATTGAATGGTGATGCTGCTGCCTTGATGATGCGAGATCGTGCCGCATATGAACAAAGAGTCAAAGAATATTGTGAAAAATATGCCAAGCCAGAACATATTGGAGCTTCTCAAGAGGAAAATTCAAGTGATGATGAGCCAAGTGAAGATGATTATGTCTCTAGTGATGAGGCCATTGCTGGCCAACCTGATCCTTAG 552 0.4076 MSSPSKRRDMDLMKLMMSDYKVETINDGMQEFFVEFHGPKDSPYQEGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDGMYGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNASDPLNGDAAALMMRDRAAYEQRVKEYCEKYAKPEHIGASQEENSSDDEPSEDDYVSSDEAIAGQPDP* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00534 183 CDD UBCc 10 143 IPR000608 -
Rops2g00534 183 Pfam Ubiquitin-conjugating enzyme 11 142 IPR000608 -
Rops2g00534 183 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 73 89 IPR023313 -
Rops2g00534 183 MobiDBLite consensus disorder prediction 149 183 - -
Rops2g00534 183 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1 148 IPR000608 -
Rops2g00534 183 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 29 136 - -
Rops2g00534 183 SUPERFAMILY UBC-like 5 148 IPR016135 -
Rops2g00534 183 FunFam Ubiquitin-conjugating enzyme 5, E2 1 159 - -
Rops2g00534 183 Gene3D Ubiquitin Conjugating Enzyme 1 161 IPR016135 -
Rops2g00534 183 SMART ubc_7 4 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00534 Rops-Chr2 7782275 7785395 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00534 K10576 - gmx:100527756 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00534 2 7782275 7785395 Rops2g00534 2 7782275 7785395 ECH