Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00519 ATGTTCCAACATTGGATTTGTCATCTTTGTTGGGAGATCAAGGTGTCAACCTCAGTGCCTCCAGGGAACTTGTCATTGACATCAGAGGCTCCCAAAAGTCATGCACAGGACCCTGATGTGGTTGCAGGGTCAAAACCTTCTTTAACAAGTCCACCACCAGCAGCACTTCCACCACCTCCACCCGAAGACCCTAATTTCGTTGAAGGGTCCAGAAAAAAAAACACGGAACCAAATACAACAAGATACAAACTTGTCCTTAATATGGCTTCAAGGAATGGAATCAATTCAATCCACAAACGTGATCCACTTGCTGAATCTGCTGAGTTGCTGACAGACACAGTAGCTGTAATCGTAGCTCAACTCCACTTCTGTTCTCCCCAAAACAGAACTAAGGTCATGGATGTGTTGTTATTATTACTAGCTCTGTTGGTTGTTTTGCCAAGCCTGAGTCTAGTAGAGAGCCGCAGAACTCCAGTTCTGGACTATTTCGAATACAGTGCTGTGAACTGCAGAGCTCACAGTGCCTCATTGACAGATTTTGGAGGGGCTGGTGATGGAAAAACTTTGAACACACAAGCCTTTCAAACAGCCATTAATCATCTGAGCCAATATGCATCAAATGGAGGGTCTCAACTTATTGTTCCCCCAGGAAGATGGTTGACTGGCAGCTTCAATCTCACTAGCCATTTCACTTTATTCCTTCACAAGGATGCTGTAATTCTTGGCTCTCAGGATGAAAGTGACTGGCCAGTGATCGATCCTCTTCCATCTTATGGTCGAGGGAGGGACACACAAGGGGGAAGGTTTAGCAGTCTAATTTTTGGAACCAACCTCACAGATGTAATCATAACTGGGGACAATGGTACCATACATGGACAAGGTGATCTGTGGTGGCAAAAATTCCACAAGGGGCAACTCAGTTATACCAGGCCTTACCTGATTGAAATCATGTACTCAGATAATGTTCAGATATCCGATCTCACTTTGATTGATTCTCCATCATGGAATATCCATCCTATATACAGCAGCAACGTTATTGTTCAAGGCATCACAATTCTTGCTCCTGTGACATCACCAAATACAGATGGGATCAACCCTGACTCTTGCACAAACACAAGAATTGAGGATTGTTATATTGTGTCCGGGGATGATTGTGTGGCTGTGAAGAGTGGTTGGGATGAGTATGGTATATCTTATGGAATGCCAACAAAGCAGCTGGTAATCAGAAGACTCACTTGTATTTCTCCATTCAGTGCTGTGATTGCTTTAGGGAGTGAGATGTCTGGTGGGATTCAAGATGTAAGGGCTGAGGACATTGTAGCCATCAATTCAGAATCGGGAGTGAGGATCAAAACTGCTGTTGGAAGAGGAGGCTATGTCAAGGACATATATGTTAGAAGGATGACTATGAAAACAATGAAATGGGCATTTTGGATGACAGGAAATTATGGCTCTCATGCTGATAATAACTATGATCCTAATGCACTTCCTGTGATTCAGAATATCAATTATCGTGATATGGTTGCTGAGAATGTGACTATGGCTGCAAGGTTGGAGGGCTTATCTAATGCCCCATTTACTGGAATCTGCATATCTAATGTAACCATTGGACTAGCAAAGAAGGCTAAAAAAGTTCCATGGACTTGCACTGATATTGCTGGGATTTCAAGAGGTGTGACTCCTGTGCCATGTGATCTGTTGCCAGACCAGGGAGTTGAGAAGCTTGGGGCATGTACCTTCCCAGAAGATAGTTTGCCAATTGAGGATGTCAAGGTTCAAACGTGTACTAGCAGAAGGAATTTCTGA 1806 0.4358 MFQHWICHLCWEIKVSTSVPPGNLSLTSEAPKSHAQDPDVVAGSKPSLTSPPPAALPPPPPEDPNFVEGSRKKNTEPNTTRYKLVLNMASRNGINSIHKRDPLAESAELLTDTVAVIVAQLHFCSPQNRTKVMDVLLLLLALLVVLPSLSLVESRRTPVLDYFEYSAVNCRAHSASLTDFGGAGDGKTLNTQAFQTAINHLSQYASNGGSQLIVPPGRWLTGSFNLTSHFTLFLHKDAVILGSQDESDWPVIDPLPSYGRGRDTQGGRFSSLIFGTNLTDVIITGDNGTIHGQGDLWWQKFHKGQLSYTRPYLIEIMYSDNVQISDLTLIDSPSWNIHPIYSSNVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISYGMPTKQLVIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIVAINSESGVRIKTAVGRGGYVKDIYVRRMTMKTMKWAFWMTGNYGSHADNNYDPNALPVIQNINYRDMVAENVTMAARLEGLSNAPFTGICISNVTIGLAKKAKKVPWTCTDIAGISRGVTPVPCDLLPDQGVEKLGACTFPEDSLPIEDVKVQTCTSRRNF* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00519 601 PANTHER PECTIN LYASE-RELATED 143 589 - -
Rops2g00519 601 Pfam Glycosyl hydrolases family 28 270 544 IPR000743 GO:0004650|GO:0005975
Rops2g00519 601 Gene3D - 162 555 IPR012334 -
Rops2g00519 601 MobiDBLite consensus disorder prediction 50 65 - -
Rops2g00519 601 MobiDBLite consensus disorder prediction 26 79 - -
Rops2g00519 601 SUPERFAMILY Pectin lyase-like 165 569 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00519 Rops-Chr2 7548615 7561127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00519 122 596 Glycoside Hydrolase AT3G61490 66.390 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00519 - - gmx:100785841 870.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00519 2 7548615 7561127 Rops2g00519 2 7548615 7561127 ECH