Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00512 ATGCCTCCTTCAGTTCGCAGACTCACAATGGCAGCAATATCTAACTCCTTGTCACTGAAGCATGGTTTCTCTCTGCCTCCGAATCCAGCTCGTCCTTCTTCCACTTCCCTATCATTCAGATCCTTCCGGAGATGTTACGCCGCTTTCGCCAATGAGAATCGCGAGTATGTGATCGTTGGCGGCGGAAACTCCGCCGGTTATGCTGCTCGTACTTTCGTCGAGCACGGCATGGCCGATGGCCGCCTTTGTATTGTGACCAAAGAGGCATATGCACCTTACGAGCGTCCAGCTTTGACAAAAGCATACTTGTTCCCACCGGATAAGAAACCAGCACGCCTTCCTGGGTTTCACACTTGTGTTGGATCCGGTGGAGAAAGGCAGACTCCGGAGTGGTATAAAGAGAATGGCATAGAGATGTTTTATCAAGATCCAGTAGAAAATGTTGATATTGAAAAGCAAACTTTGACAACTAGTTCTGGAAAACAACTTAAGTATGGATCGCTTATTATTGCTACAGGATGTACAGCCTCAAGGTTTCCAGAGAAAATTGGGGGAAACCTACCTGGTGTTCACTACATTCGGGATGTTGCAGATGCGGATGCACTGATTTCATCATTAGAAAAAGCCAAAAAGGTTGTGGTTGTTGGAGGTGGTTATATAGGAATGGAGGTTGCTGCTGCAGCTGTTGGTTGGAAACTTGATACAACCATCATATTTCCAGATGATCACCTTTTACAAAGACTGTTCACTCCTTCTCTTGCCCGGAGATATGAAGAACTCTACCAAAAGAATGGAGTCAAAATCTTGAAGGGTGCCTCCATAAAAAATTTGGAAGCTGGTTCTAACGGACGTGTAGCTGCCGTGAAACTTGGAGATGGATCCATTGTAGAAGCAGATACGGTAATTATAGGCATTGGAGCAAAACCTGCTGTGAGTCCCTTTGAGGGTGTGGGTCTGAATGCAGATGTTGGTGGTATACAGGTTGATGGTCAGTTTCGGGCAAACATTCCTGGAATCTTTGCAATCGGTGATGTAGCAGCTTTCCCTTTAAAGATCTATAATCGTATTGCTCGAGTGGAACATGTAGATCATGCTCGTCGCTCTGCACAGCACTGTGTGAAAGCATTACTCAGTGCACAAACTCACACGTATGATTATCTTCCATACTTCTACTCAAGGGTTTTTGAATATGAAGGGAGCCCTAGAAAAGTATGGTGGCAGTTCTTCGGAGACAATGTTGGAGAAACAGTTGAAATTGGAAATTTTGATCCTAAAATAGCTACCTTTTGGATTGAATCTGGTAAGCTGAAAGGAGTTCTCGTTGAAAGTGGGAGCCCTGAGGAGTTTCAGCTTCTGCCTAAACTTGCAAGAAGTCAGCCTCCGATTGATAAAGCTAAACTTCAAAACGCAACTTCAGTAGAGGAGGCCCTAGACATTGCTCGGCAATCCATGCAAGCTGAAGCCAATGTCTAG 1473 0.4508 MPPSVRRLTMAAISNSLSLKHGFSLPPNPARPSSTSLSFRSFRRCYAAFANENREYVIVGGGNSAGYAARTFVEHGMADGRLCIVTKEAYAPYERPALTKAYLFPPDKKPARLPGFHTCVGSGGERQTPEWYKENGIEMFYQDPVENVDIEKQTLTTSSGKQLKYGSLIIATGCTASRFPEKIGGNLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPDDHLLQRLFTPSLARRYEELYQKNGVKILKGASIKNLEAGSNGRVAAVKLGDGSIVEADTVIIGIGAKPAVSPFEGVGLNADVGGIQVDGQFRANIPGIFAIGDVAAFPLKIYNRIARVEHVDHARRSAQHCVKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGETVEIGNFDPKIATFWIESGKLKGVLVESGSPEEFQLLPKLARSQPPIDKAKLQNATSVEEALDIARQSMQAEANV* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00512 490 Gene3D - 57 372 IPR036188 -
Rops2g00512 490 SUPERFAMILY FAD/NAD(P)-binding domain 51 376 IPR036188 -
Rops2g00512 490 PRINTS Pyridine nucleotide disulphide reductase class-I signature 211 236 - -
Rops2g00512 490 PRINTS Pyridine nucleotide disulphide reductase class-I signature 55 77 - -
Rops2g00512 490 PRINTS Pyridine nucleotide disulphide reductase class-I signature 299 313 - -
Rops2g00512 490 PRINTS Pyridine nucleotide disulphide reductase class-I signature 339 346 - -
Rops2g00512 490 Gene3D - 179 306 IPR036188 -
Rops2g00512 490 PANTHER APOPTOSIS-INDUCING FACTOR 1 54 474 - -
Rops2g00512 490 PRINTS FAD-dependent pyridine nucleotide reductase signature 211 229 - -
Rops2g00512 490 PRINTS FAD-dependent pyridine nucleotide reductase signature 298 314 - -
Rops2g00512 490 PRINTS FAD-dependent pyridine nucleotide reductase signature 57 76 - -
Rops2g00512 490 PRINTS FAD-dependent pyridine nucleotide reductase signature 324 346 - -
Rops2g00512 490 PRINTS FAD-dependent pyridine nucleotide reductase signature 165 183 - -
Rops2g00512 490 Pfam Pyridine nucleotide-disulphide oxidoreductase 56 369 IPR023753 GO:0016491
Rops2g00512 490 Gene3D - 389 475 IPR016156 GO:0016491|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00512 Rops-Chr2 7468555 7474705 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00512 168 388 Acyl Lipid Metabolism Gene Families AT1G48030 26.068 5.12e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00512 K08232 - gmx:100819919 863.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00512 2 7468555 7474705 Rops2g00512 2 7468555 7474705 ECH