Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00501 ATGAATGGTAATCCGAAGCACGAGCGCCGTTGGGCGTCTGACTCCGTACCCGGAAAAGCAACCGTCAGTGCCGGAACTTCGCCGGGAACTGAGTACAATTCCTCCGCCGAGGAGTTTGTTGAGGTTACTCTTGATCTTCGAGACGATGACACAATCGTTCTTCGGAGTGTTGAACCAGCCTCTGTTATTAACATCGACGACAGCGTCGCCGGTAGCGGATATGAAACTCCGGCTTCTGTTTCGCGGTCGCCGACGATCCGGAGAAGCTCTTCCAGAGGCTTCAGGCAGTTCTCGCAGGAGCTGAAAGCCGAGGCAGTTGCCAAGGCGAGGCAATTCTCGCAGGAGCTTAAAGCGGAGCTCCGGCGGTTCTCGTGGAGCCACGGCCATGCTTCGCGCGCTCTTTCATCGTCTTCCTCTGTTCAGAACGGTACCGGAGGTGGTGCCGCAGGCGCCGGAGGAGGATTTGAAACGGCGTTGGCTGCTCGAGCTCTTAGGAAGCAACGTGCTCAACTTGATCGCACACGTTCCAGTGCTCAGAAAGCACTTCGTGGTTTGAAATTCATCAGCAAGAAATCCAATGGCGTTGATGCGTGGAACGAAGTGCAGAGGAACTTCGATAGGCTTGCTAAGGACGATTATCTTTATCGCTCTGATTTCGGTCAATGCATAGGGATGAAAGATTCCAAGGAATTTGCTCTGGAACTCTTTGATACTCTAGGTCGTAAGCGAAGATTGAGAGTTGACAAGATCAATAGGGATGAACTTTTCGAATTTTGGTCGCAAATTACCGATCAAAGTTTTGATTCGCGGCTCCAGATCTTCTTCGACATGGTGGACAAGAACGAAGATGGAAGAATCACCGAAGAAGAAGTTAAAGAGATTATCATGTTAAGTGCTTCTGCAAATAAGTTGTCTAGATTGAAGGAACAGGCTGAGGAATATGCAGCTTTAATTATGGAAGAATTAGATCCGGAAAGACTTGGTTACATCGAGCTATGGCAATTGGAGACGCTTCTTTTACAAAAGGACACGTATCTCAACTACAGCCAAGCTCTAAGCTACACAAGCCAAGCTTTGAGCCAGAACCTACAGGGGCTCAGGAAGAGAAGTCCCATACGTAGGATGAGCCGCAGATTGCTCTACTATTTGCAAGAGAATTGGAAGAGACTTTGGCTTTTAACATTGTGGCTTTGCATAATGATTGGGCTGTTTACGTGGAAGTTTCTTCAGTACAAGCGCAAAGATGCTTTTCAGATCATGGGTTACTGTCTTCTCACAGCCAAAGGTGCAGCTGAGACTCTAAAGTTCAACATGGCACTTATACTCTTGCCCGTGTGCAGAAACACCATCACTTGGCTAAGGTCTACCAAGCTGTCTTACGCTGTACCTTTTGATGACAACATCAACTTTCATAAGACAATTGCTGGGGCCATCGTCATTGGTGTTATACTTCATGTTGGGGATCACCTTGCTTGTGATTTTCCTAGGCTTGTAAAGACGTCTGAAGCTGAATATGAGATTTATTTGAAAGGTGTATTTGGCAAGCATAAACCCAGTTACGGAGACCTAGTTAAAGGGGTCGAAGGTGTGACTGGAATTTTAATGGTGGTTTTCATGGCAATAGCATTTACGCTTGCAACCAAATGGTTCAGGAGAAATCTCATTAGGCTGCCTAAACCATTTAGTAGGCTCACCGGCTTCAATGCCTTCTGGTATTCACATCATCTGTTTGTCATTGTCTATGTCCTGCTCATCGTCCATGGTGTAAATCTTTATCTCGTGCACAAATGGTACTTTAAAACGACATGGATGTATCTTGCAGTTCCAGTTTTACTCTATGCGTCAGAAAGAACACTCAGACTCTTTCGTTCTGGTTTATATACTGTTCATCTTATAAAGGTTGCTATATATCCTGGAAATGTTCTCACATTGCAAATGTCTAAGCCTCCTCAATTTCGCTACAAGAGCGGACAATACATGTTTGTACAATGCCCTGCTGTTTCTCCGTTTGAGTGGCATCCGTTTTCTATTACCTCAGCCCCTGGGGATGACTACCTGAGTGTTCACATTCGGCAACTGGGTGACTGGACACAGGAGCTTAAAAGGGTATTCTCTGAGGCCTGTGAGCCTCCTGTATCTGGGAAGAGTGGGCTTCTCAGGGCTGATGAAACGACTAAGAAAAGTTTGCCGAAGTTAAGGATAGATGGACCTTACGGCGCGCCAGCTCAAGATTATAGAAAATATGATGTTCTGTTACTTGTCGGTCTCGGGATAGGAGCGACACCTTTCATCAGCATTCTAAAAGATCTTCTCAACAACATTATCAAAATGGAGGAGCTGGCGGATTCAGTCTCTGATATAAGCAGAGGTTCAGACCTTAGTGTTGGGAGCACTGATTCACCAACTCTTAATAAAATTGCTCCGAAACGGAAGAAAACACTGAAGACTACCAACGCTTATTTCTACTGGGTTACAAGAGAACAAGGATCTTTCGATTGGTTCAAAGGAGTCATGAATGAAGTAGCTGAGCTTGATCAAAGGGGTGTCATTGAGATGCACAACTACTTGACCAGCGTATACGAGGAAGGAGATGCTAGGTCCGCCCTCATCACCATGGTTCAAGCGCTCAACCACGCCAAAAATGGAGTTGATATTGTTTCTGGGACTAGGGTGCGAACTCATTTTGCTAGGCCTAACTGGAAGAAGGTATTCTCTAAAATGTGTTCCAAGCACTATAATGGACGAATAGGGGTATTTTATTGTGGAGCACCGGTTTTGGCCAAAGAACTTAGCAAGCTCTGCTTTGAGTTCAATGAAAAAGGTCCAACAAAATTTGAGTTCCACAAGGAGCATTTCTAA 2859 0.4561 MNGNPKHERRWASDSVPGKATVSAGTSPGTEYNSSAEEFVEVTLDLRDDDTIVLRSVEPASVINIDDSVAGSGYETPASVSRSPTIRRSSSRGFRQFSQELKAEAVAKARQFSQELKAELRRFSWSHGHASRALSSSSSVQNGTGGGAAGAGGGFETALAARALRKQRAQLDRTRSSAQKALRGLKFISKKSNGVDAWNEVQRNFDRLAKDDYLYRSDFGQCIGMKDSKEFALELFDTLGRKRRLRVDKINRDELFEFWSQITDQSFDSRLQIFFDMVDKNEDGRITEEEVKEIIMLSASANKLSRLKEQAEEYAALIMEELDPERLGYIELWQLETLLLQKDTYLNYSQALSYTSQALSQNLQGLRKRSPIRRMSRRLLYYLQENWKRLWLLTLWLCIMIGLFTWKFLQYKRKDAFQIMGYCLLTAKGAAETLKFNMALILLPVCRNTITWLRSTKLSYAVPFDDNINFHKTIAGAIVIGVILHVGDHLACDFPRLVKTSEAEYEIYLKGVFGKHKPSYGDLVKGVEGVTGILMVVFMAIAFTLATKWFRRNLIRLPKPFSRLTGFNAFWYSHHLFVIVYVLLIVHGVNLYLVHKWYFKTTWMYLAVPVLLYASERTLRLFRSGLYTVHLIKVAIYPGNVLTLQMSKPPQFRYKSGQYMFVQCPAVSPFEWHPFSITSAPGDDYLSVHIRQLGDWTQELKRVFSEACEPPVSGKSGLLRADETTKKSLPKLRIDGPYGAPAQDYRKYDVLLLVGLGIGATPFISILKDLLNNIIKMEELADSVSDISRGSDLSVGSTDSPTLNKIAPKRKKTLKTTNAYFYWVTREQGSFDWFKGVMNEVAELDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGVDIVSGTRVRTHFARPNWKKVFSKMCSKHYNGRIGVFYCGAPVLAKELSKLCFEFNEKGPTKFEFHKEHF* 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00501 952 Gene3D - 739 952 IPR039261 -
Rops2g00501 952 SUPERFAMILY EF-hand 196 349 IPR011992 -
Rops2g00501 952 Gene3D Translation factors 615 707 - -
Rops2g00501 952 FunFam Respiratory burst oxidase protein A 739 952 - -
Rops2g00501 952 CDD EFh 230 296 IPR002048 GO:0005509
Rops2g00501 952 Pfam FAD-binding domain 628 741 IPR013112 GO:0016491
Rops2g00501 952 Pfam Ferric reductase like transmembrane component 429 585 IPR013130 -
Rops2g00501 952 Pfam Respiratory burst NADPH oxidase 170 269 IPR013623 GO:0004601|GO:0050664
Rops2g00501 952 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 746 952 IPR039261 -
Rops2g00501 952 MobiDBLite consensus disorder prediction 74 94 - -
Rops2g00501 952 SFLD NADPH oxidase subgroup (NOX) 108 952 - -
Rops2g00501 952 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 624 744 IPR017927 GO:0016491
Rops2g00501 952 MobiDBLite consensus disorder prediction 73 94 - -
Rops2g00501 952 ProSiteProfiles EF-hand calcium-binding domain profile. 266 301 IPR002048 GO:0005509
Rops2g00501 952 Gene3D - 171 287 - -
Rops2g00501 952 Pfam Ferric reductase NAD binding domain 748 934 IPR013121 GO:0016491
Rops2g00501 952 ProSitePatterns EF-hand calcium-binding domain. 279 291 IPR018247 -
Rops2g00501 952 PANTHER NADPH OXIDASE 231 952 - -
Rops2g00501 952 SUPERFAMILY Riboflavin synthase domain-like 627 740 IPR017938 -
Rops2g00501 952 MobiDBLite consensus disorder prediction 19 35 - -
Rops2g00501 952 FunFam Respiratory burst oxidase homolog A 615 707 - -
Rops2g00501 952 PRINTS Cytochrome B-245 heavy chain signature 530 553 IPR000778 GO:0016020|GO:0016491
Rops2g00501 952 PRINTS Cytochrome B-245 heavy chain signature 730 743 IPR000778 GO:0016020|GO:0016491
Rops2g00501 952 PRINTS Cytochrome B-245 heavy chain signature 753 770 IPR000778 GO:0016020|GO:0016491
Rops2g00501 952 Coils Coil 297 317 - -
Rops2g00501 952 Coils Coil 161 181 - -
Rops2g00501 952 CDD NOX_Duox_like_FAD_NADP 631 894 - -
Rops2g00501 952 MobiDBLite consensus disorder prediction 1 35 - -
Rops2g00501 952 FunFam Respiratory burst oxidase homolog A 171 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00501 Rops-Chr2 7279531 7287471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00501 9 952 Miscellaneous Gene Families AT1G64060 78.737 0.0 1543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00501 K13447 - gmx:100801077 1702.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02219 1 43935953 43948011 Rops2g00501 2 7279531 7287471 PCT