Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00452 ATGACTCTAAATTTGTCCACTCCTTCCTTCTCTCGCTTACTTCATCGCCTTTCTTCTTCTTCTTCTCTTGCTTTTCCCAAATTCGCTGAAACCTGTCACAACCGTAACACCATCACTCCTTTCCCCCCTCTTTTCTTCGCCACCACTTCCTCGCTTCCCAACCTCCTCAACACCAAAGCTTCCGTTAGCGAGAGCCAAAATGAAACCTCCGACGACACCGTTTCCGACTCAAACCTACTCGACCAACAACTTATGCTCCGAGTTGCATCCACCGCTAAAGACGCCGACGAGGCATTACAGATCATTGCCAATAACTCCACCAGAAACGGCGGTGTCGTTTCCAACTCTGATTCTTGCTCCATTATAACCGCCGCCCTTAACCGCAATAATCCTCAACTCGCGTTGTCTGTTTTCTACGCCATGCGTTCCAGTTTTGATCGAGTTGGTGAGAATGGTCCTTTAGTTGAGAGATGGAGGTGGTCAAGACCAAATGCAAATGTTTATACATCGTTAATTCAGGGTTTGGCGACATCGTTGAGGGTTTCTGATGCTCTTAGCGTGATTAAATATATTTGTGAAGTTGGCGTTTCTCCTGGTGAGGAGGTCCCTTTTGGGAAGATAGTGAAATGTCCTAGTTGTCGGATAGCTGTTGCTGTTGCACAGCCACAGCAAGGTATTCAGGTAGTATCTTGTGCAAAGTGTCGTTACCAATACGAACTTGTTTCGGGTAACATAGTCAGTATTCAATCGGAAGAAATCAGCATGGACATTACAGCATGGGAAAGGGGGTTAAGATTCCTGAAACTGACGAAGCAAAGCATTCCTTCTGCCGTTCACTCTATTGTGGTGCAGACCCCTTCTGGTATGGCTCGTACTCACAGATTTGCTACCAAAACGGTTGATCTACCAGCACAAGAAGGTGAAAGAGTAACTGTTGCTGTGGCAGCTCCATCAAATGTTTATAGAAAGGTTGGGCCCTTTAAATTCAGTCCAAGGGCCCCGGATTTCTATCCTGGTGAGGCTATGTGCATAACAAACCACAAAGATGGGCGGGAATCGCTTCTCTTAAGAGCCCCAAGGAAGGAAGAAAATTCATCATTACTCAAACCTTCCCTCCTCTTTCCACTCCTGGCTTTGTTGGCCACCGGTGATGCTGCCTCTGGACTTATTGACCCCAGCCTGCCTCAATTCCTATCAGTTGTTGCAGTTTCATCTCTTGCTGTTGGATCTACGTTGAACTCCTTTGTTCTTCCCCAGTTTAATCAGCTTCCACAAAGGTCAGTAGAAGCAATTGCTATCAAACAACAACTTTTATCTCAATATGATGTGCTTCAGTCTCGCATCAATGAGCTAAAAGAAGCTGCTGAAAAAGAGATTTGGATGTTAGCTCGAATGTGCCAACTTGAGAATAAAATTTCAGCTGTTGGAGAACCTTCTTATCGGACTCGGAGAAGTAAAGTCCAAAGGGTCCAAGAGAGCCTGCAAAACTCCCTCCGGGGACGAATTGAATTGATTGCCAGCTATGCTAGGATTTCCTCAATGATTGAAATTGAAGTGGAGATGGAAACTGATGTTCTCGTTGCTGAAACTGCTAGTAATGTGGATAGTATCACAGAACAGATAGAACAAATCATGGAGCTTGAAAATTTGGAGGAGAGATGGAAAATGCAAGCAGAAGCCAATGATGAGGCCGAAAGGCTTCTTAGTTCCCAGTCCATACCTTTTGATGAAGTTTAA 1737 0.4508 MTLNLSTPSFSRLLHRLSSSSSLAFPKFAETCHNRNTITPFPPLFFATTSSLPNLLNTKASVSESQNETSDDTVSDSNLLDQQLMLRVASTAKDADEALQIIANNSTRNGGVVSNSDSCSIITAALNRNNPQLALSVFYAMRSSFDRVGENGPLVERWRWSRPNANVYTSLIQGLATSLRVSDALSVIKYICEVGVSPGEEVPFGKIVKCPSCRIAVAVAQPQQGIQVVSCAKCRYQYELVSGNIVSIQSEEISMDITAWERGLRFLKLTKQSIPSAVHSIVVQTPSGMARTHRFATKTVDLPAQEGERVTVAVAAPSNVYRKVGPFKFSPRAPDFYPGEAMCITNHKDGRESLLLRAPRKEENSSLLKPSLLFPLLALLATGDAASGLIDPSLPQFLSVVAVSSLAVGSTLNSFVLPQFNQLPQRSVEAIAIKQQLLSQYDVLQSRINELKEAAEKEIWMLARMCQLENKISAVGEPSYRTRRSKVQRVQESLQNSLRGRIELIASYARISSMIEIEVEMETDVLVAETASNVDSITEQIEQIMELENLEERWKMQAEANDEAERLLSSQSIPFDEV* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00452 578 Coils Coil 434 454 - -
Rops2g00452 578 Gene3D Tetratricopeptide repeat domain 58 207 IPR011990 GO:0005515
Rops2g00452 578 Coils Coil 537 567 - -
Rops2g00452 578 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 1 576 - -
Rops2g00452 578 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 164 198 IPR002885 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00452 - - gmx:100781803 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00452 2 6469649 6475400 Rops2g00452 2 6469649 6475400 ECH