Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00250 ATGGCCTGCAACAATTGCTCTTCTTCAACTCGTTCTTCTTGGCTCATAGCCTCCTCCACCAAGCGCCATCCCTTCTTCCTCTCAACCTCCTTCAAATTCAACGTCCCCACTGCTTCTTCACAACAAATTCAATGGCATTCGAAATCTTATACTCGCAGAAACTTCCGTCAGCCTCACCAAATCGAACGCCATTGGGTTGAAGCTGTTGATCAATCTCTCGCATCTCCAGAGAGATTCAGCGTGGCGTCATATAACATACTTGGGGTTAGAAATGCTTCTCAACACACTGATTTATACGTTAACATTCCTTCTCGTTACCTCAAATGGGATCGTCGTAAGAGAATTATTTGTGATGAGCTCTTTGGATGGGACCCAGACATTATCTGTTTACAAGAGGTGGACAAGTATTTTGAACTCTCAAACATTTTGGTTAAAGCAGGATACATGGGATCTTATAAGAGACGCACTGGAGATTCAGTTGACGGTTGTGCAATGTTTTGGAAAGCTGATAAGTTCCGGTTATTAGATGGGGAAAGCATTCAATTTAAAGACATTGGCCTTCGTGATAATGTTGCTCAACTTCTAGTTTTTGAGACGTGTGAGTCTGACTCAAGAAGACTGTTAGTGGGTAACATCCACGTACTTTATAACCCAAACAGGGGAGAAGTTAAATTAGGTCAAATTCGTTTTCTCTCATCAAGAGCACAGACCCTCTCAGAGAAATGGGGTAATACCCCTGTTGTCCTGGCTGGTGATTTTAATAGCACTCCTCAGAGTGGAATATACAAGTTCTTGTCATCATCAGAGCTTAATATCATGCTATATGACAGAAAGGAGTTATCTGGACAGAAACGTTGTCGTCCTGCTCAAGTTTTAGGCGAGAAAATGGACACAGTTGCTCCAGTTATCTTACTGGATGGATTGTTAAACTGCTGGACAGAAGAAGAGGTAAAAATGGCAACCGGTGACTCTGAGCGTCATTTGGCTGTGCATCCATTAAAGCTGAATAGTTCGTACGCCACAGTTAATGGTTCAACTGGTAAACGGGGATTCAATGGTGAACCTGTGGCAACTTCCTATCACTCAAAGTTTCTTGGCACTGTAGATTACTTGTGGTACTCAGACGGTATTGTACCTACAAGAGTCCTTGATACCGTTCCAATTAGCGATCTCCTGAGGGCAGGTGGTCTCCCATGCAAGAAAGTGGGAAGCGACCATTTGGCCTTGGTTTCTGAATTTTCCTTCTCAGTTACCCATAATAAATCTACAAACATGGTTGCAGCAGCAGCATCACCTGAGGTAGACATTGAAGACCATGACAATCTGCAGTCTTAA 1335 0.4307 MACNNCSSSTRSSWLIASSTKRHPFFLSTSFKFNVPTASSQQIQWHSKSYTRRNFRQPHQIERHWVEAVDQSLASPERFSVASYNILGVRNASQHTDLYVNIPSRYLKWDRRKRIICDELFGWDPDIICLQEVDKYFELSNILVKAGYMGSYKRRTGDSVDGCAMFWKADKFRLLDGESIQFKDIGLRDNVAQLLVFETCESDSRRLLVGNIHVLYNPNRGEVKLGQIRFLSSRAQTLSEKWGNTPVVLAGDFNSTPQSGIYKFLSSSELNIMLYDRKELSGQKRCRPAQVLGEKMDTVAPVILLDGLLNCWTEEEVKMATGDSERHLAVHPLKLNSSYATVNGSTGKRGFNGEPVATSYHSKFLGTVDYLWYSDGIVPTRVLDTVPISDLLRAGGLPCKKVGSDHLALVSEFSFSVTHNKSTNMVAAAASPEVDIEDHDNLQS* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00250 444 Gene3D Endonuclease/exonuclease/phosphatase 52 431 IPR036691 -
Rops2g00250 444 SUPERFAMILY DNase I-like 72 418 IPR036691 -
Rops2g00250 444 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 47 415 - -
Rops2g00250 444 Pfam Endonuclease/Exonuclease/phosphatase family 82 406 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00250 Rops-Chr2 3981074 3987726 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00250 80 267 EF-hand Containing Proteins AT5G54130 29.064 1.57e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00250 - - gmx:100779393 724.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00250 2 3981074 3987726 Rops2g00250 2 3981074 3987726 ECH