Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00243 ATGATGAAGGTTTGTGCTTGTTCGGTGTCATCCATAAAGTTTCCCAGGTGGCGCCCCCTAATCTCTCTTTCTTCTTCGTCTTGCATTATGTCTCTTTTATCCACTCAAAATGCTTCAGCTTCCATAGCCACGGTCGCATCAGAGTCCACCACGAAGCCCAAACAGAAGCAACCGTGGTTAATTGTTGGCCTTGGCAATCCTGGCAAGAAATACGCTGGCACCCGCCACAATGTAGGATTTGAGATGGTTGATACTATAGCTGAAGCCGAAGGGATATCTATGAGCAGTGTTTCCTTCAAGGCCCTTTTTGGAAAAGGTTTTATAGGTGATGTTCCAATTATACTTGCAAAACCACAGACTTTTATGAATTCAAGTGGTGAATCTGTTGGGGCCATAGTTTCATATTACAAGATTCCAGTGAAGCAAGTACTTGTGATCTTTGATGACATGGATTTGCCTTTTGCTAAATTGCGGCTGCTACCAAAGGGTGGACATGGAGGTCACAATGGAATGAAGAGTGTTATTAATCACCTTAAAGGGAATAATGGTTTTCCCCGTTTAAGAATTGGCATTGGACGGCCTCCTGGGAAAATGGATCCTGTAGCATTTGTTCTTCGCCCTTTCACTAAACAGGAAAGGGAAGAGTTGAATTTTACCTTACAACATGGATTAGAAGCAGTTCGGATTCTTTTGCTGGAGGGATTTGATAAAAGTGCAACATTGGTTAATAGTGCCAAAAAGATAGAGCAAACAGGTTGA 759 0.4256 MMKVCACSVSSIKFPRWRPLISLSSSSCIMSLLSTQNASASIATVASESTTKPKQKQPWLIVGLGNPGKKYAGTRHNVGFEMVDTIAEAEGISMSSVSFKALFGKGFIGDVPIILAKPQTFMNSSGESVGAIVSYYKIPVKQVLVIFDDMDLPFAKLRLLPKGGHGGHNGMKSVINHLKGNNGFPRLRIGIGRPPGKMDPVAFVLRPFTKQEREELNFTLQHGLEAVRILLLEGFDKSATLVNSAKKIEQTG* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00243 252 ProSitePatterns Peptidyl-tRNA hydrolase signature 1. 71 84 IPR018171 GO:0004045
Rops2g00243 252 Pfam Peptidyl-tRNA hydrolase 60 239 IPR001328 GO:0004045
Rops2g00243 252 Gene3D - 43 246 IPR036416 GO:0004045
Rops2g00243 252 ProSitePatterns Peptidyl-tRNA hydrolase signature 2. 164 174 IPR018171 GO:0004045
Rops2g00243 252 Hamap Peptidyl-tRNA hydrolase [pth]. 58 236 IPR001328 GO:0004045
Rops2g00243 252 PANTHER PEPTIDYL-TRNA HYDROLASE 54 243 IPR001328 GO:0004045
Rops2g00243 252 FunFam Peptidyl-tRNA hydrolase 55 246 - -
Rops2g00243 252 NCBIfam aminoacyl-tRNA hydrolase 59 228 IPR001328 GO:0004045
Rops2g00243 252 SUPERFAMILY Peptidyl-tRNA hydrolase-like 58 243 IPR036416 GO:0004045
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00243 Rops-Chr2 3860388 3865006 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00243 K01056 - gmx:100526866 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00243 2 3860388 3865006 Rops2g00243 2 3860388 3865006 ECH