Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02490 ATGGGTGAGATTGGGGACGAACCTCTAACGCCGGCGGGGAGGCTGTTCCTGCAGCCACGTACGAACCAATTAATCCACTGTGTGATGGGGCTGAAGAACCCCATCGACGTGGATTCAATAAAATCCCAAATCCAAAGCTCCCTGATGCTCCAACACCCAAGGTTCACCAGCCTCATGGTCCGCGACCACCGAGGCGTGGAGCACTGGCGCCCCACCCAAATCGACATCGACAGCCACCTCCGCGTTATCCATGAGCCACTCTCCTCCTCCTCCTCCGATGAATCGGCCATCAACGAGTACCTGGCGGATTTATCCACATACGGTTCGGGGCTGAGCATCGAGAAACCCCTGTGGGAAATCCATATACTGAGGGCCCACAAGTGCGCCATATTTCGAATCCATCACTCCCTTGGGGATGGGATCTCCTTGATGTCAATGTTCCTCGCCAGCTGCAGGAAGGTCCAGGATCCACACGCCCTCCCCTCCATATCTGCCCCGCCCAATTCCAATTCCCTTCGCACCAAATTCACCTTCTCCTCTCTTCTCCTCACCCTCTGGTTTTCTTTCATCTTCGTCATCCAATTCTTCCTCAGGTGTTTATGGATTCGTGACCGCAATTCCGCCATATCCGGCGGCTCCGGCGTTGACCTCTGGCCCAGGAAGATAGCCACCGCCTCCTTTTCCTTGGAACACATGAAGACCGTCAAGAGGGCTGTTCCTAATGCGACCATAAATGACGTTCTATTTGCAGTCATATCATCTGGGATATCAAGATACCTGGACTTCCGAGAACCTAATAGACTGCGAGACGGGGTTCAGCTAACCGGGTTAGCTATGGTTAACTTAAGAAAGCAGCCAGGATTGCAGGAACTATCCAATTTGATGAGAAGCAATTCAGGAGCAAGGTGGGGTAACAAATTTGGTATGCTTCTACTACCCATATATTATCATAGAAGCAACAGTTCAGATCCTCTAGAATATTTGAAGAGAGCAAAAGTAATGATTGACAGAAAGAAACAGTCTTTGGAGGCCCTTTTCTCATACAGAATTGGAGATTTTGTAATGTCGACTCTTGGTCCAAAGGTTGCTAGCTTGCTAAATTACCGGATACTCTGCAACACTACCTTTACAATCTCAAATGTTGTTGGCCCACAAGAGGAAATTATGCTTGGAGGCAATCCCATAACGTTCTTAAGGGCAAATAATTCAGCCTTGCCTCATGCACTCGTTTTGAATATGGTGAGCTATGCTGGAAGGGCAGACATGCAAGTGCAGGTGGCCAAAGACATCATTCCCGATCCTGAGTTTCTTGCGAAATGTTTTGAAGATGCACTGCTTGAAATGATAGACCGGGTTACGGCCAAAATCTGA 1371 0.4916 MGEIGDEPLTPAGRLFLQPRTNQLIHCVMGLKNPIDVDSIKSQIQSSLMLQHPRFTSLMVRDHRGVEHWRPTQIDIDSHLRVIHEPLSSSSSDESAINEYLADLSTYGSGLSIEKPLWEIHILRAHKCAIFRIHHSLGDGISLMSMFLASCRKVQDPHALPSISAPPNSNSLRTKFTFSSLLLTLWFSFIFVIQFFLRCLWIRDRNSAISGGSGVDLWPRKIATASFSLEHMKTVKRAVPNATINDVLFAVISSGISRYLDFREPNRLRDGVQLTGLAMVNLRKQPGLQELSNLMRSNSGARWGNKFGMLLLPIYYHRSNSSDPLEYLKRAKVMIDRKKQSLEALFSYRIGDFVMSTLGPKVASLLNYRILCNTTFTISNVVGPQEEIMLGGNPITFLRANNSALPHALVLNMVSYAGRADMQVQVAKDIIPDPEFLAKCFEDALLEMIDRVTAKI* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02490 456 Pfam WS/DGAT C-terminal domain 303 448 IPR009721 -
Rops1g02490 456 PANTHER O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN 6 450 IPR045034 GO:0008374|GO:0045017
Rops1g02490 456 Pfam Wax ester synthase-like Acyl-CoA acyltransferase domain 53 175 IPR004255 GO:0004144|GO:0045017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02490 Rops-Chr1 48039599 48044651 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02490 4 456 Acyl Lipid Metabolism Gene Families AT5G53390 33.473 1.43e-82 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02490 - - aprc:113868708 735.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02490 1 48039599 48044651 Rops1g02490 1 48039599 48044651 ECH