Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02471 ATGGGTGAAGAGGGAATAGTCAGTGATGTGAAGAAATCCAATCCAAAACTAACGTTACTGCCCCTCATAGCTCTAATCTTCTATGAAGTATCTGGGGGTCCTTTTGGAGTGGAGGATTCAATTAGGGCTGGAGGGGGTCCTCTATTGTCTTTGCTTGGATTCTTAATTTTCCCTCTAATATGGAGTATTCCAGAAGCTCTGGTTACAGCTGAACTGGCCACAAGCTTCCCTAACAATGGTGGATATGTTATTTGGATATCCTCAGCTTTTGGACCTTTCTGGGGGTTTCAGGAAGGGTTCTGGAAATGGTTCAGTGGGGTCATGGACAATGCTCTTTACCCGGTTTTGTTCCTGGATTACTTGAAACATTCGTTGCCAATCTTTAACCGAACGATAGCTCGAATCCCTGCTCTTTTAGGGATTACCTTTTCACTAACCTACTTGAATTACCGAGGCCTTCACATTGTTGGCCTTTCTGCTGTTCTGCTTGCAGTTTTCTCACTTTTCCCATTTCTCATTATGGGGATTCTTTCCATTCCACATATTAGGCCCAGGCGATGGCTTGTTGTAGATTTTAACAAGGTGGATTGGCGAGGATACTTCAATAACATGTTTTGGAACTTAAATTATTGGGATAAGGCGAGTACCCTTGCAGGAGAGGTTGAGAATCCCAGTAAAACGTTCCCAAAAGCACTTCTTGGGGGAGTAGTTTTGGTGATCTCCTCATATTTGATTCCACTGCTTGCGGGAACAGGGGCTTTGAGATCCTCACCAAGTGAATGGACAGATGGTTATTTTGCAGAAGTGGGGATGTTAATTGGTGGCTTTTGGCTGAAACTGTGGATTCAAGCAGCTGCTGCCATGTCTAACCTTGGCTTGTTTGAGGCAGAAATGAGCAGTGATGCTTTTCAACTTCTAGGGATGAGCAACATGGGAATGCTTCCAGCTGTATTTTCGTCAAGGTCTAAGTATGGAACGCCCACTGTTAGCATTTTGTTCTCTGCCACTGGAGTTATCTTCTTGTCATGGATGAGCTTTCAGGAAATCCTGGAGTTCCTCAATTTCTTATATGCAATAGGAATGCTTCTTGAGTTTGCAGCTTTTATAACTTTGAGATTGAAGAAGCCAAATCTTTATAGACCTTACAGAGTTCCATTGCAAACATTTTGGGTGGCCATGCTTTGCCTGCCGCCTGCCTTGTTGCTTATTCTTGTTATGTGCCTGGCTTCTTTGAGAACATTCTTTGTGAGTGGATCAGTAATTCTCGTGGGATTTATTCTGTACCCTATCTTGGCTCAAGCCAAGAATAAGAATTGGTTATTATTTGAAGCAGAATCACCCTCCTTACCTTCCAATGGTTGGCAGCAATGCCATTCAATTGTTTCAGAACTGGTTGACCAAGAAACCAAAGATGCTGAGCTTCTTGTGGGCTCACCGTTTGCTGTTGTGGAAGAAGAACTGTCTTTAATGCAAAGTGATTCTAAACCAAACTAG 1494 0.4311 MGEEGIVSDVKKSNPKLTLLPLIALIFYEVSGGPFGVEDSIRAGGGPLLSLLGFLIFPLIWSIPEALVTAELATSFPNNGGYVIWISSAFGPFWGFQEGFWKWFSGVMDNALYPVLFLDYLKHSLPIFNRTIARIPALLGITFSLTYLNYRGLHIVGLSAVLLAVFSLFPFLIMGILSIPHIRPRRWLVVDFNKVDWRGYFNNMFWNLNYWDKASTLAGEVENPSKTFPKALLGGVVLVISSYLIPLLAGTGALRSSPSEWTDGYFAEVGMLIGGFWLKLWIQAAAAMSNLGLFEAEMSSDAFQLLGMSNMGMLPAVFSSRSKYGTPTVSILFSATGVIFLSWMSFQEILEFLNFLYAIGMLLEFAAFITLRLKKPNLYRPYRVPLQTFWVAMLCLPPALLLILVMCLASLRTFFVSGSVILVGFILYPILAQAKNKNWLLFEAESPSLPSNGWQQCHSIVSELVDQETKDAELLVGSPFAVVEEELSLMQSDSKPN* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02471 497 Gene3D Amino acid/polyamine transporter I 14 446 - -
Rops1g02471 497 PANTHER POLYAMINE TRANSPORTER PUT1 11 447 IPR044566 GO:0022857
Rops1g02471 497 FunFam Amino acid permease, putative 13 443 - -
Rops1g02471 497 Pfam Amino acid permease 20 402 IPR002293 GO:0016020|GO:0022857|GO:0055085
Rops1g02471 497 PIRSF AA_transporter 9 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02471 Rops-Chr1 47780827 47783162 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02471 3 467 Organic Solute Cotransporters AT3G19553 75.106 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02471 - - vun:114172952 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02471 1 47780827 47783162 Rops1g02471 1 47780827 47783162 ECH