Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02470 ATGAATGATAAGCACCAAAATCAAGCATATATAGGAGTCAAAACCCTAGGGCCTGTTTGTCTGGCCGCTGGTGGCAATAAGCGAAGAGTTGTCTTCTGGAATCACCTCCCAAGGTTTATGGCTTCCTCTTCTTCTCAACAGGAAGGTTTATCTGAAGAAGATTACGACTTAATCTACGGCTCTGAATCGGGTTGGGTCGAAGCTCGAACCTCTTGCCCTCACCTCACCTCTTTATCCGCCGATCTTACCCACATTCCAACCCCCGATACTCCCTGCAACAGGTGCCAACACCCGAGTGAAAACTGGTTGTGTTTGTCATGTAAGGACGTGCTCTGTAGCCGTTTTGTGAACAAGCACATGCTCCACCATTTTCAGGAGACAAATCATAGTGTGGCTCTCAGTTTCAGTGATCTGTCAGTCTGGTGTTTCTCCTGTGATGCTTACCTGGATGCTCAAGTTATTGCTCAACTGCGTCCCGTTTATGAAGTAGCCTATATATTGAAATTCGGTGAGCCTCCACCACTTCGAGCAAATCCACTTCCTTCTACTGGAGATAATCAAGCTGAAGCTTGA 573 0.4677 MNDKHQNQAYIGVKTLGPVCLAAGGNKRRVVFWNHLPRFMASSSSQQEGLSEEDYDLIYGSESGWVEARTSCPHLTSLSADLTHIPTPDTPCNRCQHPSENWLCLSCKDVLCSRFVNKHMLHHFQETNHSVALSFSDLSVWCFSCDAYLDAQVIAQLRPVYEVAYILKFGEPPPLRANPLPSTGDNQAEA* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02470 190 Pfam Zn-finger in ubiquitin-hydrolases and other protein 92 150 IPR001607 GO:0008270
Rops1g02470 190 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 172 IPR013083 -
Rops1g02470 190 SUPERFAMILY RING/U-box 70 163 - -
Rops1g02470 190 ProSiteProfiles Zinc finger UBP-type profile. 70 170 IPR001607 GO:0008270
Rops1g02470 190 PANTHER HISTONE DEACETYLASE-LIKE PROTEIN 42 187 - -
Rops1g02470 190 SMART Zf_UBP_1 91 140 IPR001607 GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02470 - - pcin:129286846 252.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02470 1 47776269 47777839 Rops1g02470 1 47776269 47777839 ECH