Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02449 ATGGATCCGTGCCCCTTCGTGCGGATCCTCGTCGGAAACCTGGCAATCAAATCTCTGGCATCGTCGAAGCCCTCTTTCTCCGGCAAAGTGCACCCATCGAGTTCACCATGCTTCTGCGAGATCAAAGTGAAGGGTGTGGATTCTCCTAAAAGTCAAGTTGCCACCGTTCCTCTAACATCGGAAACAGACACACATCCACACTCCCTCGCCGCAAGCTTCGATTTCCCCAAATCCCAAATCCCCAAAAACCCCTTAATCATCAAGATCTCTGTTTACAAGGGTAGAACAACCCCCTCATGTGCCTTCAGCTCCGCGAAACTATTGGGCAAGATTTCCGTGCCACTCGATCTCACCTTGGCTGAATCGAGACCCTGCATGTTCCAAAACGGCTGGCTCACTCTCCCACGCAACTCCTCTTTGCATTTAACGGTTCGGGCAGAACCCGACCCGAGATTCGTCTTCCGGTTCGACGGTGAACCGGAGTGCAGCCCGCAGGTTTTTCAAGTCAAAGGGGATGTTAAGCAACCGGTTTTCACTTGCAAGTTCAGTTTCAGAGATAGAGAAAGAAACCCGGGTCAGTTCTCTTCTGCTGCGAATGTGAATAATCAGACAGCTGAGCGAAAAGGATGGTCCATCACAGTGCATGATTTATCGGGTTCGCCGGTGGCGGCTGCGTCCATGGTCACCCCCTTCGTACCCTCACCCGGTTCACAGCGGGTCAGCAGGTCCAACCCGGGAGCCTGGCTCATAATCCGACCCGATGGAGATGGCACGTGGAAGCCTTGGGGCCGCCTCGAGGCATGGCGCGAACCTAACAACTCCGTGGGCTATCGGTTCCAGATTCTTCCGGCCACGGCCGACCCAGTGACACTTGCCGGGTGTAGTATTAGTTCCCAACATGGCGGGAAATTCACCATCGATGTTACCTCCGGCGTTACTCCGGTGAACACACCGCACGGCAGCTGGGATCTTGGGTCCGGTTCTGGATCGGGTTCGGATTTTGGGTTCGAACAGCAATTGTTGTACAAGGGGTTTGTGATGTCGGCGAAGGTGGACGGTGAAAGGAAGTGTAGCAAGCCGGAGGTGGAGGTTGGGGTGAAGCACGTGACTTGTACGGAGGATGCTGCGGCTTTCGTTGCTCTCGCCGCTGCCATGGATTTGAGCATGGATGCTTGCAAGTTGTTCTCTCAAAAGCTCCGAAAGGACTTGAGGCAGTAG 1218 0.5443 MDPCPFVRILVGNLAIKSLASSKPSFSGKVHPSSSPCFCEIKVKGVDSPKSQVATVPLTSETDTHPHSLAASFDFPKSQIPKNPLIIKISVYKGRTTPSCAFSSAKLLGKISVPLDLTLAESRPCMFQNGWLTLPRNSSLHLTVRAEPDPRFVFRFDGEPECSPQVFQVKGDVKQPVFTCKFSFRDRERNPGQFSSAANVNNQTAERKGWSITVHDLSGSPVAAASMVTPFVPSPGSQRVSRSNPGAWLIIRPDGDGTWKPWGRLEAWREPNNSVGYRFQILPATADPVTLAGCSISSQHGGKFTIDVTSGVTPVNTPHGSWDLGSGSGSGSDFGFEQQLLYKGFVMSAKVDGERKCSKPEVEVGVKHVTCTEDAAAFVALAAAMDLSMDACKLFSQKLRKDLRQ* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02449 405 PANTHER OS08G0163500 PROTEIN 1 404 IPR010410 -
Rops1g02449 405 Pfam Protein of unknown function (DUF1005) 1 404 IPR010410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02449 Rops-Chr1 47336732 47338237 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02449 - - gmx:100816033 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02449 1 47336732 47338237 Rops1g02449 1 47336732 47338237 ECH