Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02332 ATGGTGAGTGTATCTGAGATTCGTAAGGCTCAAAGGGCAGAAGGCCCTGCTAACATTCTGGCCATTGGCACTGCCACCCCTCCAAACTGTGTTGATCAGAGTACCTACCCTGATTACTATTTCAGAATCACAAACAGCGAGCATAAGACTGAGCTTAAAGAGAAATTTCAGCGCATGTAAGTTGTTCTGTCCAGTTATCGACTAAATCTGGTTGAATACATTGCATCATGA 231 0.4372 MVSVSEIRKAQRAEGPANILAIGTATPPNCVDQSTYPDYYFRITNSEHKTELKEKFQRM*VVLSSYRLNLVEYIAS* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02332 75 Gene3D - 1 67 IPR016039 GO:0016746
Rops1g02332 75 Pfam Chalcone and stilbene synthases, N-terminal domain 5 63 IPR001099 -
Rops1g02332 75 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 4 60 IPR011141 GO:0009058|GO:0016747
Rops1g02332 75 SUPERFAMILY Thiolase-like 1 61 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02332 Rops-Chr1 45569768 45571943 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02332 K00660 - zju:107422581 115.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02332 1 45569768 45571943 Rops1g02332 1 45569768 45571943 ECH