Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02267 ATGAAACATGAAGAAGAATCAACCCCCCCAGATATCAACAAATATCAAAACCAAATGTCAAAGGCACTATGCAAATGCAATAGCAGCAGCATTTTTGGCCTCTCCTTCACCTTCATTTTTACCCTATGGTCCCTCCTCTTCATCTTCTACTCCACCCTTCGCCTTGTTCGTGGTAATGGAGCTGTTTTAGAGTTTAATGAAACAGCTAACTCCAGCAATCTTGGAGGCCCTGGTCAGAAACTTGCAAAACCCATGTACTCACTTGCTGAAACAACTAGTTTAGAAGAAGTATTTTGGCGAGTTTTAGGTAATACTAATTTAGTGTGCAAGCTACAACCTCGACAAGAGGAAAAGAAACTTGAATCAGCACAGCTTTCTGGTGAGAATGCTCATCCATCTTCTCTGAATCATAATGAATCCCGAAACACGGGAAAGCAAGAAAAGAGCATGGACTTGAACTCTGCACTTGTTAACATGACTCACAGGCTTGAATCTGATGGTTCAGTGTACAATTATGCCTCTGAGTCCAAAGGTGCAAAGGTGGTGGCCCATAATAAGGAGGCCAAAGGTGCAAAAAATATACTTGGGAAGGATCATGATAAGTACCTGAGGAACCCTTGTTCTGTTGGAGGAAAGTTTGTTGTTATTGAGCTTTCGGAAGAGACTCTGGTTGATTCTGTGAAAATTGCAAACTTTGAGCATTATTCTTCCAACTTCAAGGAATTTGAATTGGCTGGTAGTTTGAGCTATCCAACTGAATCATGGAGCATGTTGGGAAACTTTGTTGCTGCCAATGCAAAGCATGCACAGATGTTTAAGCTGCCTGAACCCAAATGGGTCAGGTATTTGAACGTGAGCTTGCTTAGTCATTATGGATCTGAGTTTTATTGCACACTGAGTGTTGTAGAAGTTTATGGGATCAATGCAATAGAGAGGATGCTTAAGGATCTGATAGTTGCTTCAGTGGGACCCATTCCTGACAAGTCACCAGCGCATAATATCAGTGACCCCACTTCTTTGAAGTCAGAAGCTGGTCAAACAGACAGAAAAGGAAAAGAAGTTGAAAGCAAGAACGATACTGTGGCAGCTGAGACATCATCAAGCAATGATGAAACTCAAAAATCTGACGCGGAAGTGACAAAAAATCCAGTGACTGTCAACTTGGTTCCCGATCCTGTATTAGAACTTAGACAACAATTAAATGGTAGGATAGCTGGTGACACTATTCTGAAGATTTTGATGCAGAAAGTAAGGTCAGTGGAGGTAAATTTATCTGCGCTGGAGGATTACATCAAAGAATTGAACAGGAGACAAGGGGTTGCAATACCAGATCTTGAGAAAGAGTTGTCCAAATTATCAGAAAGCCTGGGACAAAGCAAGTCAGAGATCAAAGATCTCTGGCAGTGGAACACAAATATGGAAAAAGGAATATCTGAAGTTGAGTCATGGAAAGATGCTGTCTCATCTCAACTTAATGAATTAGCCAGAGAAAATGGCATGCTAAGATTAGATGTTCGAAAGGTTGCAACTGATCAAGCAAATCTGGAAACCAAAGAGTTTGCTGTGTTAGCAACGAGTCTTGTTTTTGTGTGCCTTGCCGGTCTCAAGATAATTTCAGCACACATGTTGAAGTTTTCTGCAGCATACAATGCCGATAAGATGCGCCAAACAATGAGAGGTTGGGTTACGTTATTTGTATACTGCAGTGTAACAATATCCATTATCTTGTTTTATAGCTAG 1740 0.4098 MKHEEESTPPDINKYQNQMSKALCKCNSSSIFGLSFTFIFTLWSLLFIFYSTLRLVRGNGAVLEFNETANSSNLGGPGQKLAKPMYSLAETTSLEEVFWRVLGNTNLVCKLQPRQEEKKLESAQLSGENAHPSSLNHNESRNTGKQEKSMDLNSALVNMTHRLESDGSVYNYASESKGAKVVAHNKEAKGAKNILGKDHDKYLRNPCSVGGKFVVIELSEETLVDSVKIANFEHYSSNFKEFELAGSLSYPTESWSMLGNFVAANAKHAQMFKLPEPKWVRYLNVSLLSHYGSEFYCTLSVVEVYGINAIERMLKDLIVASVGPIPDKSPAHNISDPTSLKSEAGQTDRKGKEVESKNDTVAAETSSSNDETQKSDAEVTKNPVTVNLVPDPVLELRQQLNGRIAGDTILKILMQKVRSVEVNLSALEDYIKELNRRQGVAIPDLEKELSKLSESLGQSKSEIKDLWQWNTNMEKGISEVESWKDAVSSQLNELARENGMLRLDVRKVATDQANLETKEFAVLATSLVFVCLAGLKIISAHMLKFSAAYNADKMRQTMRGWVTLFVYCSVTISIILFYS* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02267 579 MobiDBLite consensus disorder prediction 126 140 - -
Rops1g02267 579 ProSiteProfiles SUN domain profile. 147 309 IPR012919 -
Rops1g02267 579 Pfam Sad1 / UNC-like C-terminal 184 306 IPR012919 -
Rops1g02267 579 MobiDBLite consensus disorder prediction 343 359 - -
Rops1g02267 579 MobiDBLite consensus disorder prediction 119 148 - -
Rops1g02267 579 Coils Coil 417 437 - -
Rops1g02267 579 Coils Coil 442 462 - -
Rops1g02267 579 Gene3D - 176 317 - -
Rops1g02267 579 PANTHER MEMBRANE PROTEIN CH1 RELATED 115 552 IPR045120 GO:0016020
Rops1g02267 579 MobiDBLite consensus disorder prediction 360 381 - -
Rops1g02267 579 SUPERFAMILY Galactose-binding domain-like 208 305 IPR008979 -
Rops1g02267 579 MobiDBLite consensus disorder prediction 328 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02267 Rops-Chr1 44765368 44767723 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02267 - - gmx:102668828 813.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02267 1 44765368 44767723 Rops1g02267 1 44765368 44767723 ECH